Lineage for d3kdub_ (3kdu B:)
- Root: SCOPe 2.05
Class a: All alpha proteins [46456] (286 folds) 
Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
multihelical; 3 layers or orthogonally packed helicesSuperfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) 
Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins) 
Protein Peroxisome proliferator activated receptor alpha, PPAR-alpha [69109] (1 species) Species Human (Homo sapiens) [TaxId:9606] [69110] (15 PDB entries) 
Domain d3kdub_: 3kdu B: [179297]
automated match to d1i7ga_
protein/DNA complex; complexed with nks
Details for d3kdub_
PDB Entry: 3kdu (more details), 2.07 Å
PDB Description: Crystal structure of peroxisome proliferator-activatedeceptor alpha (PPARalpha) complex with N-3-((2-(4-Chlorophenyl)-5-methyl-1,3-oxazol-4-yl)methoxy)benzyl)-N-((4-methylphenoxy)carbonyl)glycine
PDB Compounds: (B:) Peroxisome proliferator-activated receptor alphaSCOPe Domain Sequences for d3kdub_:
Sequence, based on SEQRES records: (download)
>d3kdub_ a.123.1.1 (B:) Peroxisome proliferator activated receptor alpha, PPAR-alpha {Human (Homo sapiens) [TaxId: 9606]}
shmedsetadlkslakriyeaylknfnmnkvkarvilsgkasnnppfvihdmetlcmaek
tlvaklvangiqnkeaevrifhccqctsvetvteltefakaipgfanldlndqvtllkyg
vyeaifamlssvmnkdgmlvaygngfitreflkslrkpfcdimepkfdfamkfnaleldd
sdislfvaaiiccgdrpgllnvghiekmqegivhvlrlhlqsnhpddiflfpkllqkmad
lrqlvtehaqlvqiikktesdaalhpllqeiyrdmy
Sequence, based on observed residues (ATOM records): (download)
>d3kdub_ a.123.1.1 (B:) Peroxisome proliferator activated receptor alpha, PPAR-alpha {Human (Homo sapiens) [TaxId: 9606]}
shmedsetadlkslakriyeaylknfnmnkvkarvilsgkannppfvihdmetlcmaekt
lvvangiqnkeaevrifhccqctsvetvteltefakaipgfanldlndqvtllkygvyea
ifamlssvmnkdgmlvaygngfitreflkslrkpfcdimepkfdfamkfnalelddsdis
lfvaaiiccgdrpgllnvghiekmqegivhvlrlhlqsnhpddiflfpkllqkmadlrql
vtehaqlvqiikktesdaalhpllqeiyrdmy
SCOPe Domain Coordinates for d3kdub_:
Click to download the PDB-style file with coordinates for d3kdub_.
(The format of our PDB-style files is described here.)
(The format of our PDB-style files is described here.)
Timeline for d3kdub_:
- d3kdub_ first appeared in SCOPe 2.01
- d3kdub_ appears in SCOPe 2.04
- d3kdub_ is called d3kdub1 in SCOPe 2.06
- d3kdub_ appears in the current release, SCOPe 2.08, called d3kdub1
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