Lineage for d3kdtb_ (3kdt B:)

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1747085Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 1747086Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 1747087Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)
  6. 1747522Protein Peroxisome proliferator activated receptor alpha, PPAR-alpha [69109] (1 species)
  7. 1747523Species Human (Homo sapiens) [TaxId:9606] [69110] (15 PDB entries)
  8. 1747545Domain d3kdtb_: 3kdt B: [179295]
    automated match to d1i7ga_
    protein/DNA complex; complexed with 7ha

Details for d3kdtb_

PDB Entry: 3kdt (more details), 2.7 Å

PDB Description: Crystal structure of peroxisome proliferator-activatedeceptor alpha (PPARalpha) complex with N-3-((2-(4-Chlorophenyl)-5-methyl-1,3-oxazol-4-yl)methoxy)benzyl)-N-(methoxycarbonyl)glycine
PDB Compounds: (B:) Peroxisome proliferator-activated receptor alpha

SCOPe Domain Sequences for d3kdtb_:

Sequence, based on SEQRES records: (download)

>d3kdtb_ a.123.1.1 (B:) Peroxisome proliferator activated receptor alpha, PPAR-alpha {Human (Homo sapiens) [TaxId: 9606]}
shmedsetadlkslakriyeaylknfnmnkvkarvilsgkasnnppfvihdmetlcmaek
tlvaklvangiqnkeaevrifhccqctsvetvteltefakaipgfanldlndqvtllkyg
vyeaifamlssvmnkdgmlvaygngfitreflkslrkpfcdimepkfdfamkfnaleldd
sdislfvaaiiccgdrpgllnvghiekmqegivhvlrlhlqsnhpddiflfpkllqkmad
lrqlvtehaqlvqiikktesdaalhpllqeiyrdmy

Sequence, based on observed residues (ATOM records): (download)

>d3kdtb_ a.123.1.1 (B:) Peroxisome proliferator activated receptor alpha, PPAR-alpha {Human (Homo sapiens) [TaxId: 9606]}
shmedsetadlkslakriyeaylknfnmnkvkarvilsgkannppfvihdmetlcmaekt
lvvangiqnkeaevrifhccqctsvetvteltefakaipgfanldlndqvtllkygvyea
ifamlssvmnkdgmlvaygngfitreflkslrkpfcdimepkfdfamkfnalelddsdis
lfvaaiiccgdrpgllnvghiekmqegivhvlrlhlqsnhpddiflfpkllqkmadlrql
vtehaqlvqiikktesdaalhpllqeiyrdmy

SCOPe Domain Coordinates for d3kdtb_:

Click to download the PDB-style file with coordinates for d3kdtb_.
(The format of our PDB-style files is described here.)

Timeline for d3kdtb_: