SCOPe 2.05: Domain d3kcoa_: 3kco A:

Lineage for d3kcoa_ (3kco A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

6. Protein D-xylose isomerase [51666] (13 species)

7. Species Streptomyces rubiginosus [TaxId:1929] [51670] (43 PDB entries)

8. Domain d3kcoa_: 3kco A: [179273]
   automated match to d1dxia_
   complexed with dod, glo, ni

Details for d3kcoa_

PDB Entry: 3kco, 1.8 Å

PDB Description: room temperature neutron structure of d-xylose isomerase in complex with two ni2+ cations and d12-d-glucose in the linear form (refined jointly with x-ray structure 3kbn)

PDB Compounds: (A:) xylose isomerase

SCOPe Domain Sequences for d3kcoa_:

Sequence; same for both SEQRES and ATOM records:

>d3kcoa_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces rubiginosus [TaxId: 1929]}
mnyqptpedrftfglwtvgwqgrdpfgdatrraldpvesvrrlaelgahgvtfhdddlip
fgssdsereehvkrfrqalddtgmkvpmattnlfthpvfkdggftandrdvrryalrkti
rnidlavelgaetyvawggregaesggakdvrdaldrmkeafdllgeyvtsqgydirfai
epkpneprgdillptvghalafierlerpelygvnpevgheqmaglnfphgiaqalwagk
lfhidlngqngikydqdlrfgagdlraafwlvdllesagysgprhfdfkpprtedfdgvw
asaagcmrnylilkeraaafradpevqealrasrldelarptaadglqallddrsafeef
dvdaaaargmaferldqlamdhllgarg

Timeline for d3kcoa_:

• d3kcoa_ first appeared in SCOPe 2.01
  
• d3kcoa_ appears in SCOPe 2.04
  
• d3kcoa_ appears in SCOPe 2.06
  
• d3kcoa_ appears in the current release, SCOPe 2.08