SCOPe 2.05: Domain d3kbva_: 3kbv A:

Lineage for d3kbva_ (3kbv A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.15: Xylose isomerase-like [51658] (8 families)
   different families share similar but non-identical metal-binding sites

5. Family c.1.15.3: Xylose isomerase [51665] (2 proteins)

6. Protein D-xylose isomerase [51666] (13 species)

7. Species Streptomyces rubiginosus [TaxId:1929] [51670] (43 PDB entries)

8. Domain d3kbva_: 3kbv A: [179241]
   automated match to d1dxia_
   complexed with ni

Details for d3kbva_

PDB Entry: 3kbv, 1.8 Å

PDB Description: Room temperature structure of D-Xylose Isomerase in complex with 2Ni(2+) co-factors

PDB Compounds: (A:) xylose isomerase

SCOPe Domain Sequences for d3kbva_:

Sequence; same for both SEQRES and ATOM records:

>d3kbva_ c.1.15.3 (A:) D-xylose isomerase {Streptomyces rubiginosus [TaxId: 1929]}
mnyqptpedrftfglwtvgwqgrdpfgdatrraldpvesvrrlaelgahgvtfhdddlip
fgssdsereehvkrfrqalddtgmkvpmattnlfthpvfkdggftandrdvrryalrkti
rnidlavelgaetyvawggregaesggakdvrdaldrmkeafdllgeyvtsqgydirfai
epkpneprgdillptvghalafierlerpelygvnpevgheqmaglnfphgiaqalwagk
lfhidlngqngikydqdlrfgagdlraafwlvdllesagysgprhfdfkpprtedfdgvw
asaagcmrnylilkeraaafradpevqealrasrldelarptaadglqallddrsafeef
dvdaaaargmaferldqlamdhllgarg

Timeline for d3kbva_:

• d3kbva_ first appeared in SCOPe 2.01
  
• d3kbva_ appears in SCOPe 2.04
  
• d3kbva_ appears in SCOPe 2.06
  
• d3kbva_ appears in the current release, SCOPe 2.08