Lineage for d3k6lb_ (3k6l B:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 3000942Fold d.167: Peptide deformylase [56419] (1 superfamily)
    alpha-beta(5)-alpha; 3 layers: a/b/a; meander beta-sheet wraps around the C-terminal alpha-helix
  4. 3000943Superfamily d.167.1: Peptide deformylase [56420] (2 families) (S)
    nickel-dependent enzyme
  5. 3000944Family d.167.1.1: Peptide deformylase [56421] (2 proteins)
    automatically mapped to Pfam PF01327
  6. 3000945Protein Peptide deformylase [56422] (11 species)
  7. 3000951Species Escherichia coli [TaxId:562] [56423] (21 PDB entries)
  8. 3000980Domain d3k6lb_: 3k6l B: [179132]
    automated match to d1bs4a_
    complexed with 2bb, ni

Details for d3k6lb_

PDB Entry: 3k6l (more details), 2.15 Å

PDB Description: The structure of E.coli peptide deformylase (PDF) in complex with peptidomimetic ligand BB2827
PDB Compounds: (B:) Peptide deformylase

SCOPe Domain Sequences for d3k6lb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3k6lb_ d.167.1.1 (B:) Peptide deformylase {Escherichia coli [TaxId: 562]}
svlqvlhipderlrkvakpveevnaeiqrivddmfetmyaeegiglaatqvdihqriivi
dvsenrderlvlinpelleksgetgieegclsipeqralvpraekvkiraldrdgkpfel
eadgllaiciqhemdhlvgklfmdylsplkqqrirqkvekldrl

SCOPe Domain Coordinates for d3k6lb_:

Click to download the PDB-style file with coordinates for d3k6lb_.
(The format of our PDB-style files is described here.)

Timeline for d3k6lb_: