SCOPe 2.01: Domain d3k49a_: 3k49 A:

Lineage for d3k49a_ (3k49 A:)

1. Root: SCOPe 2.01

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (24 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.1: ARM repeat [48371] (24 families)

5. Family a.118.1.0: automated matches [191340] (1 protein)
   not a true family

6. Protein automated matches [190220] (4 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [186980] (3 PDB entries)

8. Domain d3k49a_: 3k49 A: [179062]
   automated match to d1m8wb_
   protein/RNA complex; complexed with cit

Details for d3k49a_

PDB Entry: 3k49, 2.5 Å

PDB Description: Puf3 RNA binding domain bound to Cox17 RNA 3' UTR recognition sequence site B

PDB Compounds: (A:) mRNA-binding protein PUF3

SCOPe Domain Sequences for d3k49a_:

Sequence, based on SEQRES records:

>d3k49a_ a.118.1.0 (A:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
splleqlrnsssdknsnsnmslkdifghslefckdqhgsrfiqrelatspasekevifne
irddaielsndvfgnyviqkffefgskiqkntlvdqfkgnmkqlslqmyacrviqkaley
idsnqrielvlelsdsvlqmikdqngnhviqkaietipieklpfilssltghiyhlsths
ygcrviqrllefgssedqesilnelkdfipyliqdqygnyviqyvlqqdqftnkemvdik
qeiietvannvveyskhkfasnvveksilygsknqkdliiskilprdknhalnleddspm
ilmikdqfanyviqklvnvsegegkkliviairayldklnksnslgnrhlasveklaalv
e

Sequence, based on observed residues (ATOM records):

>d3k49a_ a.118.1.0 (A:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
splleqlrnsssnmslkdifghslefckdqhgsrfiqrelatspasekevifneirddai
elsndvfgnyviqkffefgskiqkntlvdqfkgnmkqlslqmyacrviqkaleyidsnqr
ielvlelsdsvlqmikdqngnhviqkaietipieklpfilssltghiyhlsthsygcrvi
qrllefgssedqesilnelkdfipyliqdqygnyviqyvlqqdqftnkemvdikqeiiet
vannvveyskhkfasnvveksilygsknqkdliiskilprdknhalnleddspmilmikd
qfanyviqklvnvsegegkkliviairayldklnksngnrhlasveklaalve

Timeline for d3k49a_:

• d3k49a_ is new in SCOPe 2.01-stable
  
• d3k49a_ appears in SCOPe 2.02
  
• d3k49a_ appears in the current release, SCOPe 2.08