SCOPe 2.07: Domain d3irda_: 3ird A:

Lineage for d3irda_ (3ird A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.10: Aldolase [51569] (9 families)
   Common fold covers whole protein structure

5. Family c.1.10.1: Class I aldolase [51570] (13 proteins)
   the catalytic lysine forms schiff-base intermediate with substrate
   possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels

6. Protein Dihydrodipicolinate synthase [51574] (13 species)

7. Species Clostridium botulinum [TaxId:441771] [189048] (2 PDB entries)

8. Domain d3irda_: 3ird A: [178582]
   automated match to d1o5ka_
   complexed with cl, gol, mlt, na

Details for d3irda_

PDB Entry: 3ird, 2.23 Å

PDB Description: structure of dihydrodipicolinate synthase from clostridium botulinum

PDB Compounds: (A:) Dihydrodipicolinate synthase

SCOPe Domain Sequences for d3irda_:

Sequence; same for both SEQRES and ATOM records:

>d3irda_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Clostridium botulinum [TaxId: 441771]}
sifkgsgvaiitpftntgvdfdklseliewhiksktdaiivcgttgeattmteterketi
kfvidkvnkripviagtgsnntaasiamskwaesigvdgllvitpyynkttqkglvkhfk
avsdavstpiiiynvpgrtglnitpgtlkelcedknivavkeasgnisqiaqikalcgdk
ldiysgnddqiipilalggigvisvlanvipedvhnmcelylngkvnealkiqldslalt
nalfietnpipvktamnlmnmkvgdlrlplcemnennleilkkelkaynlm

Timeline for d3irda_:

• d3irda_ first appeared in SCOPe 2.01
  
• d3irda_ appears in SCOPe 2.06
  
• d3irda_ appears in the current release, SCOPe 2.08