SCOPe 2.03: Domain d3idxg_: 3idx G:

Lineage for d3idxg_ (3idx G:)

1. Root: SCOPe 2.03

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.172: gp120 core [56501] (1 superfamily)
   unusual fold

4. Superfamily d.172.1: gp120 core [56502] (1 family)

5. Family d.172.1.1: gp120 core [56503] (2 proteins)

6. Protein gp120 core [56504] (2 species)

7. Species Human immunodeficiency virus type 1 [TaxId:11676] [56505] (18 PDB entries)

8. Domain d3idxg_: 3idx G: [178245]
   Other proteins in same PDB: d3idxl1, d3idxl2
   automated match to d1g9mg_
   complexed with epe, gol, nag, so4

Details for d3idxg_

PDB Entry: 3idx, 2.5 Å

PDB Description: crystal structure of hiv-gp120 core in complex with cd4-binding site antibody b13, space group c222

PDB Compounds: (G:) HIV-1 HxBc2 gp120 core

SCOPe Domain Sequences for d3idxg_:

Sequence, based on SEQRES records:

>d3idxg_ d.172.1.1 (G:) gp120 core {Human immunodeficiency virus type 1 [TaxId: 11676]}
evvlvnvtenfnwckndmveqmhedicslwdqslkpcvkltplcvgagscntsvitqacp
kvsfepipihycapagfailkcnnktfngtgpctnvstvqcthgirpvvssqlllngsla
eeevvirscnftdnaktiivqlntsveinctgaghcniarakwnntlkqiasklreqfgn
nktiifkqssggdpeivthwfncggeffycnstqlfnstwfnstwstegsnntegsdtit
lpcrikqiinmwckvgkmmyappisgqircssnitgllltrdggnsnneseifrpgggdm
rdnwrselykykvvkie

Sequence, based on observed residues (ATOM records):

>d3idxg_ d.172.1.1 (G:) gp120 core {Human immunodeficiency virus type 1 [TaxId: 11676]}
evvlvnvtenfnwckndmveqmhedicslwdqslkpcvkltplcvgagscntsvitqacp
kvsfepipihycapagfailkcnnktfngtgpctnvstvqcthgirpvvssqlllngsla
eeevvirscnftdnaktiivqlntsveinctgaghcniarakwnntlkqiasklreqfgn
nktiifkqssggdpeivthwfncggeffycnstqlfnstwfnsgsdtitlpcrikqiinm
wckvgkmmyappisgqircssnitgllltrdggnsnneseifrpgggdmrdnwrselyky
kvvkie

Timeline for d3idxg_:

• d3idxg_ first appeared in SCOPe 2.01
  
• d3idxg_ appears in SCOPe 2.02
  
• d3idxg_ appears in SCOPe 2.04
  
• d3idxg_ appears in the current release, SCOPe 2.08