Lineage for d3i3ca_ (3i3c A:)

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 946133Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 947418Superfamily b.34.13: Chromo domain-like [54160] (4 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. 947452Family b.34.13.2: Chromo domain [54165] (8 proteins)
    lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold
  6. 947528Protein automated matches [191035] (1 species)
    not a true protein
  7. 947529Species Human (Homo sapiens) [TaxId:9606] [188859] (7 PDB entries)
  8. 947542Domain d3i3ca_: 3i3c A: [178043]
    automated match to d1s4za_
    complexed with na

Details for d3i3ca_

PDB Entry: 3i3c (more details), 2.48 Å

PDB Description: crystal structural of cbx5 chromo shadow domain
PDB Compounds: (A:) Chromobox protein homolog 5

SCOPe Domain Sequences for d3i3ca_:

Sequence, based on SEQRES records: (download)

>d3i3ca_ b.34.13.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}

Sequence, based on observed residues (ATOM records): (download)

>d3i3ca_ b.34.13.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d3i3ca_:

Click to download the PDB-style file with coordinates for d3i3ca_.
(The format of our PDB-style files is described here.)

Timeline for d3i3ca_: