SCOPe 2.01: Domain d3hvma_: 3hvm A:

Lineage for d3hvma_ (3hvm A:)

1. Root: SCOPe 2.01

2. Class d: Alpha and beta proteins (a+b) [53931] (376 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (8 families)

5. Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (3 proteins)
   Pfam PF04371; functionally related to the amidinotransferase, similar active site

6. Protein Putative peptidyl-arginine deiminase [111158] (3 species)

7. Species Helicobacter pylori J99 [TaxId:85963] [111159] (2 PDB entries)
   Uniprot Q9ZN18

8. Domain d3hvma_: 3hvm A: [177874]
   automated match to d2cmua1

Details for d3hvma_

PDB Entry: 3hvm, 2.1 Å

PDB Description: agmatine deiminase from helicobacter pylori

PDB Compounds: (A:) agmatine deiminase

SCOPe Domain Sequences for d3hvma_:

Sequence; same for both SEQRES and ATOM records:

>d3hvma_ d.126.1.6 (A:) Putative peptidyl-arginine deiminase {Helicobacter pylori J99 [TaxId: 85963]}
mkrmlaefekiqailmafphefsdwaycikearesflniiqtiakhakvlvcvhtndtig
yemlknlpgveiakvdtndtwardfgaisienhgvlecldfgfngwglkypsnldnqvnf
klkslgflkhplktmpyvleggsiesdgagsiltntqclleknrnphlnqngietmlkke
lgakqvlwysygylkgddtdshtdtlarfldkdtivysacedkndehytalkkmqeelkt
fkkldktpyklipleipkaifdenqqrlpatyvnfllcndalivptyndpkdaliletlk
qhtplevigvdcntlikqhgslhcvtmqly

Timeline for d3hvma_:

• d3hvma_ is new in SCOPe 2.01-stable
  
• d3hvma_ appears in SCOPe 2.02
  
• d3hvma_ appears in the current release, SCOPe 2.08