SCOPe 2.07: Domain d3h7ka1: 3h7k A:2-376

Lineage for d3h7ka1 (3h7k A:2-376)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
   duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis

4. Superfamily d.126.1: Pentein [55909] (8 families)

5. Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (3 proteins)
   Pfam PF04371; functionally related to the amidinotransferase, similar active site

6. Protein automated matches [190353] (3 species)
   not a true protein

7. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [187181] (3 PDB entries)

8. Domain d3h7ka1: 3h7k A:2-376 [177306]
   Other proteins in same PDB: d3h7ka2
   automated match to d1vkpa_
   complexed with 1pe, cl, mg, na

Details for d3h7ka1

PDB Entry: 3h7k, 1.84 Å

PDB Description: crystal structure of arabidopsis thaliana agmatine deiminase complexed with a covalently bound reaction intermediate

PDB Compounds: (A:) agmatine deiminase

SCOPe Domain Sequences for d3h7ka1:

Sequence, based on SEQRES records:

>d3h7ka1 d.126.1.6 (A:2-376) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
eesrespaehgyympaewdshaqtwigwperqdnwrhnalpaqrvfagvakaiskfepvt
vcaspaqwenarkqlpedirvvemsmndswfrdsgptfivrkrpvklsslnrniagidwn
fnawggandgcyndwshdllvsrkilaleriprfqhsmileggsihvdgegtclvteecl
lnknrnphmskeqieeelkkylgvqsfiwlprglygdedtnghidnmccfarpgvvllsw
tddetdpqyersvealsvlsnsidargrkiqviklyipeplymteeessgitqdgeaipr
lagtrlaasyvnfyianggiiapqfgdpirdkeairvlsdtfphhsvvgienareivlag
gnihxitqqqpaept

Sequence, based on observed residues (ATOM records):

>d3h7ka1 d.126.1.6 (A:2-376) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
eesrespaehgyympaewdshaqtwigwperqdnwrhnalpaqrvfagvakaiskfepvt
vcaspaqwenarkqlpedirvvemsmndswfrdsgptfivrkrniagidwnfnawggand
gcyndwshdllvsrkilaleriprfqhsmileggsihvdgegtclvteecllnknrnphm
skeqieeelkkylgvqsfiwlprglygdedtnghidnmccfarpgvvllswtddetdpqy
ersvealsvlsnsidargrkiqviklyipeplymteeessgitqdgeaiprlagtrlaas
yvnfyianggiiapqfgdpirdkeairvlsdtfphhsvvgienareivlaggnihxitqq
qpaept

Timeline for d3h7ka1:

• d3h7ka1 first appeared in SCOPe 2.01, called d3h7ka_
  
• d3h7ka1 appears in SCOPe 2.06
  
• d3h7ka1 appears in the current release, SCOPe 2.08