Lineage for d3h7ka1 (3h7k A:2-376)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2580827Fold d.126: Pentein, beta/alpha-propeller [55908] (1 superfamily)
    duplication: composed of 5 alpha-beta(2)-alpha-beta units arranged around pseudo fivefold axis
  4. 2580828Superfamily d.126.1: Pentein [55909] (8 families) (S)
  5. 2580913Family d.126.1.6: Porphyromonas-type peptidylarginine deiminase [111155] (3 proteins)
    Pfam PF04371; functionally related to the amidinotransferase, similar active site
  6. 2580937Protein automated matches [190353] (3 species)
    not a true protein
  7. 2580953Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [187181] (3 PDB entries)
  8. 2580957Domain d3h7ka1: 3h7k A:2-376 [177306]
    Other proteins in same PDB: d3h7ka2
    automated match to d1vkpa_
    complexed with 1pe, cl, mg, na

Details for d3h7ka1

PDB Entry: 3h7k (more details), 1.84 Å

PDB Description: crystal structure of arabidopsis thaliana agmatine deiminase complexed with a covalently bound reaction intermediate
PDB Compounds: (A:) agmatine deiminase

SCOPe Domain Sequences for d3h7ka1:

Sequence, based on SEQRES records: (download)

>d3h7ka1 d.126.1.6 (A:2-376) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
eesrespaehgyympaewdshaqtwigwperqdnwrhnalpaqrvfagvakaiskfepvt
vcaspaqwenarkqlpedirvvemsmndswfrdsgptfivrkrpvklsslnrniagidwn
fnawggandgcyndwshdllvsrkilaleriprfqhsmileggsihvdgegtclvteecl
lnknrnphmskeqieeelkkylgvqsfiwlprglygdedtnghidnmccfarpgvvllsw
tddetdpqyersvealsvlsnsidargrkiqviklyipeplymteeessgitqdgeaipr
lagtrlaasyvnfyianggiiapqfgdpirdkeairvlsdtfphhsvvgienareivlag
gnihxitqqqpaept

Sequence, based on observed residues (ATOM records): (download)

>d3h7ka1 d.126.1.6 (A:2-376) automated matches {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
eesrespaehgyympaewdshaqtwigwperqdnwrhnalpaqrvfagvakaiskfepvt
vcaspaqwenarkqlpedirvvemsmndswfrdsgptfivrkrniagidwnfnawggand
gcyndwshdllvsrkilaleriprfqhsmileggsihvdgegtclvteecllnknrnphm
skeqieeelkkylgvqsfiwlprglygdedtnghidnmccfarpgvvllswtddetdpqy
ersvealsvlsnsidargrkiqviklyipeplymteeessgitqdgeaiprlagtrlaas
yvnfyianggiiapqfgdpirdkeairvlsdtfphhsvvgienareivlaggnihxitqq
qpaept

SCOPe Domain Coordinates for d3h7ka1:

Click to download the PDB-style file with coordinates for d3h7ka1.
(The format of our PDB-style files is described here.)

Timeline for d3h7ka1:

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Domains from same chain:
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d3h7ka2