Lineage for d3gv6a_ (3gv6 A:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2376890Fold b.34: SH3-like barrel [50036] (21 superfamilies)
    barrel, partly opened; n*=4, S*=8; meander
    the last strand is interrupted by a turn of 3-10 helix
  4. 2378848Superfamily b.34.13: Chromo domain-like [54160] (4 families) (S)
    SH3-like barrel is capped by a C-terminal helix
  5. 2378892Family b.34.13.2: Chromo domain [54165] (8 proteins)
    lacks the SH3-like barrel first strand that can be complemented by bound peptide ligand; in shadow chromo domain the corresponding site is altered by insertion; similarity to the IL8-like fold
  6. 2378969Protein automated matches [191035] (3 species)
    not a true protein
  7. 2378970Species Human (Homo sapiens) [TaxId:9606] [188859] (13 PDB entries)
  8. 2378971Domain d3gv6a_: 3gv6 A: [177024]
    automated match to d2dnva1
    protein/DNA complex

Details for d3gv6a_

PDB Entry: 3gv6 (more details), 1.76 Å

PDB Description: Crystal Structure of human chromobox homolog 6 (CBX6) with H3K9 peptide
PDB Compounds: (A:) Chromobox protein homolog 6

SCOPe Domain Sequences for d3gv6a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d3gv6a_ b.34.13.2 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
ervfaaesiikrrirkgrieylvkwkgwaikystwepeenildsrliaafeqkere

SCOPe Domain Coordinates for d3gv6a_:

Click to download the PDB-style file with coordinates for d3gv6a_.
(The format of our PDB-style files is described here.)

Timeline for d3gv6a_: