Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
Protein Viral RNA polymerase [56695] (17 species) |
Species Hepatitis C virus [TaxId:420174] [188905] (22 PDB entries) |
Domain d3gnwb1: 3gnw B:1-570 [176786] Other proteins in same PDB: d3gnwb2 automated match to d1nb4a_ protein/RNA complex; complexed with cl, xnc |
PDB Entry: 3gnw (more details), 2.39 Å
SCOPe Domain Sequences for d3gnwb1:
Sequence, based on SEQRES records: (download)
>d3gnwb1 e.8.1.4 (B:1-570) Viral RNA polymerase {Hepatitis C virus [TaxId: 420174]} smsytwtgalitpcaaeesklpinplsnsllrhhnmvyattsrsaslrqkkvtfdrlqvl ddhyrdvlkemkakastvkakllsieeackltpphsakskfgygakdvrnlssravnhir svwedlledtetpidttimaksevfcvqpekggrkparlivfpdlgvrvcekmalydvvs tlpqavmgssygfqyspkqrveflvntwkskkcpmgfsydtrcfdstvtesdirveesiy qccdlapearqairslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkat aacraaklqdctmlvngddlvvicesagtqedaaalrafteamtrysappgdppqpeydl elitscssnvsvahdasgkrvyyltrdpttplaraawetarhtpinswlgniimyaptlw armilmthffsillaqeqlekaldcqiygacysiepldlpqiierlhglsaftlhsyspg einrvasclrklgvpplrtwrhrarsvrakllsqggraatcgrylfnwavrtklkltpip aasqldlsgwfvagysggdiyhslsrarpr
>d3gnwb1 e.8.1.4 (B:1-570) Viral RNA polymerase {Hepatitis C virus [TaxId: 420174]} smsytwtgalitpcaaeesklpinplsnsllrhhnmvyattsrsaslrqkkvtfdrlqvl ddhyrdvlkemkakastvkakllsieeackltpphsakskfgygakdvrnlssravnhir svwedlledtetpidttimaksevfcvqpgrkparlivfpdlgvrvcekmalydvvstlp qavmgssygfqyspkqrveflvntwkskkcpmgfsydtrcfdstvtesdirveesiyqcc dlapearqairslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkataac raaklqdctmlvngddlvvicesagtqedaaalrafteamtrysappgdppqpeydleli tscssnvsvahdasgkrvyyltrdpttplaraawetarhtpinswlgniimyaptlwarm ilmthffsillaqeqlekaldcqiygacysiepldlpqiierlhglsaftlhsyspgein rvasclrklgvpplrtwrhrarsvrakllsqggraatcgrylfnwavrtklkltpipaas qldlsgwfvagysggdiyhslsrarpr
Timeline for d3gnwb1: