SCOPe 2.06: Domain d3gfkb1: 3gfk B:240-311

Lineage for d3gfkb1 (3gfk B:240-311)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.60: SAM domain-like [47768] (16 superfamilies)
   4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins

4. Superfamily a.60.3: C-terminal domain of RNA polymerase alpha subunit [47789] (1 family)
   contains one classic and one pseudo HhH motifs

5. Family a.60.3.1: C-terminal domain of RNA polymerase alpha subunit [47790] (2 proteins)

6. Protein automated matches [191020] (3 species)
   not a true protein

7. Species Bacillus subtilis [TaxId:1423] [188809] (2 PDB entries)

8. Domain d3gfkb1: 3gfk B:240-311 [176587]
   Other proteins in same PDB: d3gfka_, d3gfkb2
   automated match to d1z3eb1
   protein/DNA complex; protein/RNA complex

Details for d3gfkb1

PDB Entry: 3gfk, 2.3 Å

PDB Description: Crystal structure of Bacillus subtilis Spx/RNA polymerase alpha subunit C-terminal domain complex

PDB Compounds: (B:) DNA-directed RNA polymerase subunit alpha

SCOPe Domain Sequences for d3gfkb1:

Sequence; same for both SEQRES and ATOM records:

>d3gfkb1 a.60.3.1 (B:240-311) automated matches {Bacillus subtilis [TaxId: 1423]}
keedqkekvlemtieeldlsvrsynclkragintvqelankteedmmkvrnlgrksleev
kakleelglglr

Timeline for d3gfkb1:

• d3gfkb1 first appeared in SCOPe 2.01, called d3gfkb_
  
• d3gfkb1 was called d3gfkb_ in SCOPe 2.05
  
• d3gfkb1 appears in SCOPe 2.07
  
• d3gfkb1 appears in the current release, SCOPe 2.08