SCOPe 2.04: Domain d3gdkc_: 3gdk C:

Lineage for d3gdkc_ (3gdk C:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.2: Ribulose-phoshate binding barrel [51366] (7 families)

5. Family c.1.2.3: Decarboxylase [51375] (4 proteins)

6. Protein automated matches [190130] (11 species)
   not a true protein

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [188935] (5 PDB entries)

8. Domain d3gdkc_: 3gdk C: [176538]
   automated match to d1dqwa_

Details for d3gdkc_

PDB Entry: 3gdk, 2 Å

PDB Description: Crystal structure of the orotidine 5'-monophosphate decarboxylase from Saccharomyces cerevisiae

PDB Compounds: (C:) orotidine 5'-phosphate decarboxylase

SCOPe Domain Sequences for d3gdkc_:

Sequence, based on SEQRES records:

>d3gdkc_ c.1.2.3 (C:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
katykeraathpspvaaklfnimhekqtnlcasldvrttkellelvealgpkicllkthv
diltdfsmegtvkplkalsakynfllfedrkfadigntvklqysagvyriaewaditnah
gvvgpgivsglkqaaeevtkeprgllmlaelsckgslatgeytkgtvdiaksdkdfvigf
iaqrdmggrdegydwlimtpgvglddkgdalgqqyrtvddvvstgsdiiivgrglfakgr
dakvegeryrkagweaylrrcgqq

Sequence, based on observed residues (ATOM records):

>d3gdkc_ c.1.2.3 (C:) automated matches {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
katykeraathpspvaaklfnimhekqtnlcasldvrttkellelvealgpkicllkthv
diltdfsmegtvkplkalsakynfllfedrkfadigntvklqysagvyriaewaditnah
gvvgpgivsglkqaaeevtkeprgllmlaelsckgslatgeytkgtvdiaksdkdfvigf
iaqrdmggrdegydwlimtpgvgrtvddvvstgsdiiivgrglfakgrdakvegeryrka
gweaylrrcgqq

Timeline for d3gdkc_:

• d3gdkc_ first appeared in SCOPe 2.01
  
• d3gdkc_ appears in SCOPe 2.03
  
• d3gdkc_ appears in SCOPe 2.05
  
• d3gdkc_ appears in the current release, SCOPe 2.08