SCOPe 2.08: Domain d3g5ic_: 3g5i C:

Lineage for d3g5ic_ (3g5i C:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.70: Nucleoside hydrolase [53589] (1 superfamily)
   core: 3 layers, a/b/a ; mixed beta-sheet of 8 strands, order 32145687; strand 7 is antiparallel to the rest

4. Superfamily c.70.1: Nucleoside hydrolase [53590] (2 families)

5. Family c.70.1.0: automated matches [191403] (1 protein)
   not a true family

6. Protein automated matches [190539] (7 species)
   not a true protein

7. Species Escherichia coli K-12 [TaxId:83333] [189208] (2 PDB entries)

8. Domain d3g5ic_: 3g5i C: [176380]
   Other proteins in same PDB: d3g5ib2, d3g5id2
   automated match to d3b9xc1
   complexed with bme, ca, dnb

Details for d3g5ic_

PDB Entry: 3g5i, 2.1 Å

PDB Description: crystal structure of the e.coli riha pyrimidine nucleosidase bound to a iminoribitol-based inhibitor

PDB Compounds: (C:) Pyrimidine-specific ribonucleoside hydrolase rihA

SCOPe Domain Sequences for d3g5ic_:

Sequence, based on SEQRES records:

>d3g5ic_ c.70.1.0 (C:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
alpilldcdpghddaiaivlalaspeldvkaitssagnqtpektlrnvlrmltllnrtdi
pvaggavkplmreliiadnvhgesgldgpalpeptfapqnctavelmaktlresaepvti
vstgpqtnvalllnshpelhskiarivimggamglgnwtpaaefniyvdpeaaeivfqsg
ipvvmagldvthkaqihvedterfraignpvstivaelldffleyhkdekwgfvgaplhd
pctiawllkpelftsverwvgvetqgkytqgmtvvdyyyltgnkpnatvmvdvdrqgfvd
lladrlkfya

Sequence, based on observed residues (ATOM records):

>d3g5ic_ c.70.1.0 (C:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
alpilldcdpghddaiaivlalaspeldvkaitssagnqtpektlrnvlrmltllnrtdi
pvaggavkplmrelgldgpalpeptfapqnctavelmaktlresaepvtivstgpqtnva
lllnshpelhskiarivimggamglgnwtpaaefniyvdpeaaeivfqsgipvvmagldv
thkaqihvedterfraignpvstivaelldfekwgfvgaplhdpctiawllkpelftsve
rwvgvetqgkytqgmtvvdyyyltgnkpnatvmvdvdrqgfvdlladrlkfya

Timeline for d3g5ic_:

• d3g5ic_ first appeared in SCOPe 2.01
  
• d3g5ic_ appears in SCOPe 2.07