SCOPe 2.01: Domain d3g5ib_: 3g5i B:

Lineage for d3g5ib_ (3g5i B:)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.70: Nucleoside hydrolase [53589] (1 superfamily)
   core: 3 layers, a/b/a ; mixed beta-sheet of 8 strands, order 32145687; strand 7 is antiparallel to the rest

4. Superfamily c.70.1: Nucleoside hydrolase [53590] (2 families)

5. Family c.70.1.0: automated matches [191403] (1 protein)
   not a true family

6. Protein automated matches [190539] (3 species)
   not a true protein

7. Species Escherichia coli K-12 [TaxId:83333] [189208] (1 PDB entry)

8. Domain d3g5ib_: 3g5i B: [176379]
   automated match to d3b9xc1
   complexed with bme, ca, dnb

Details for d3g5ib_

PDB Entry: 3g5i, 2.1 Å

PDB Description: crystal structure of the e.coli riha pyrimidine nucleosidase bound to a iminoribitol-based inhibitor

PDB Compounds: (B:) Pyrimidine-specific ribonucleoside hydrolase rihA

SCOPe Domain Sequences for d3g5ib_:

Sequence, based on SEQRES records:

>d3g5ib_ c.70.1.0 (B:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
salpilldcdpghddaiaivlalaspeldvkaitssagnqtpektlrnvlrmltllnrtd
ipvaggavkplmreliiadnvhgesgldgpalpeptfapqnctavelmaktlresaepvt
ivstgpqtnvalllnshpelhskiarivimggamglgnwtpaaefniyvdpeaaeivfqs
gipvvmagldvthkaqihvedterfraignpvstivaelldffleyhkdekwgfvgaplh
dpctiawllkpelftsverwvgvetqgkytqgmtvvdyyyltgnkpnatvmvdvdrqgfv
dlladrlkfya

Sequence, based on observed residues (ATOM records):

>d3g5ib_ c.70.1.0 (B:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
salpilldcdpghddaiaivlalaspeldvkaitssagnqtpektlrnvlrmltllnrtd
ipvaggavkplmrelgldgpalpeptfapqnctavelmaktlresaepvtivstgpqtnv
alllnshpelhskiarivimggamglgnwtpaaefniyvdpeaaeivfqsgipvvmagld
vthkaqihvedterfraignpvstivaelldfflkwgfvgaplhdpctiawllkpelfts
verwvgvetqgkytqgmtvvdyyyltgnkpnatvmvdvdrqgfvdlladrlkfya

Timeline for d3g5ib_:

• d3g5ib_ is new in SCOPe 2.01-stable
  
• d3g5ib_ appears in SCOPe 2.02
  
• d3g5ib_ appears in the current release, SCOPe 2.08, called d3g5ib1