Lineage for d3f8ib1 (3f8i B:419-622)

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2076966Fold b.122: PUA domain-like [88696] (1 superfamily)
    pseudobarrel; mixed folded sheet of 5 strands; order 13452; strand 1 and 3 are parallel to each other
  4. 2076967Superfamily b.122.1: PUA domain-like [88697] (14 families) (S)
  5. 2077175Family b.122.1.12: SRA domain-like [159368] (2 protein domains)
    Pfam PF02182; recognizes the modified cytosine base (m5C) by flipping it out of DNA
  6. 2077176Protein E3 ubiquitin-protein ligase UHRF1 [159369] (2 species)
  7. 2077185Species Mouse (Mus musculus) [TaxId:10090] [159371] (10 PDB entries)
    Uniprot Q8VDF2 405-613! Uniprot Q8VDF2 418-625
  8. 2077198Domain d3f8ib1: 3f8i B:419-622 [175571]
    Other proteins in same PDB: d3f8ia2, d3f8ib2
    automated match to d2zo0b1
    protein/DNA complex

Details for d3f8ib1

PDB Entry: 3f8i (more details), 2.29 Å

PDB Description: Mouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group P21
PDB Compounds: (B:) E3 ubiquitin-protein ligase UHRF1

SCOPe Domain Sequences for d3f8ib1:

Sequence; same for both SEQRES and ATOM records: (download)

>d3f8ib1 b.122.1.12 (B:419-622) E3 ubiquitin-protein ligase UHRF1 {Mouse (Mus musculus) [TaxId: 10090]}

SCOPe Domain Coordinates for d3f8ib1:

Click to download the PDB-style file with coordinates for d3f8ib1.
(The format of our PDB-style files is described here.)

Timeline for d3f8ib1:

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