SCOPe 2.08: Domain d3eybd_: 3eyb D:

Lineage for d3eybd_ (3eyb D:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Branchiostoma floridae [TaxId:7739] [188654] (1 PDB entry)

8. Domain d3eybd_: 3eyb D: [175304]
   automated match to d1fbya_

Details for d3eybd_

PDB Entry: 3eyb, 2.79 Å

PDB Description: Structural and functional insights into the ligand binding domain of a non-duplicated RXR from the invertebrate chordate amphioxus

PDB Compounds: (D:) Nuclear hormone receptor RXR

SCOPe Domain Sequences for d3eybd_:

Sequence, based on SEQRES records:

>d3eybd_ a.123.1.1 (D:) automated matches {Branchiostoma floridae [TaxId: 7739]}
dmpvekiqeaemavepkdgnmveqpndpvtnicqaadkqlvtlvewakriphfsdlpidd
qvillragwnelliaafshrsidvkdgillasglhvhrssahqagvgtifdrvltelvak
mrdmkmdktelgclraivlfnpdakgltdpslveslrekvyasleeyckqqypeqpgrfa
klllrlpalrsiglkclehlfffkligdtpidtflmeml

Sequence, based on observed residues (ATOM records):

>d3eybd_ a.123.1.1 (D:) automated matches {Branchiostoma floridae [TaxId: 7739]}
dmpvekiqeaemavepdkqlvtlvewakriphfsdlpiddqvillragwnelliaafshr
sidvkdgillasglhvhrssahqagvgtifdrvltelvakmrdmkmdktelgclraivlf
npdakgltdpslveslrekvyasleeyckqqypeqpgrfaklllrlpalrsiglkclehl
fffkligdtpidtflmeml

Timeline for d3eybd_:

• d3eybd_ first appeared in SCOPe 2.01
  
• d3eybd_ appears in SCOPe 2.07