SCOPe 2.07: Domain d3ebmd1: 3ebm D:1-172

Lineage for d3ebmd1 (3ebm D:1-172)

1. Root: SCOPe 2.07

2. Class b: All beta proteins [48724] (178 folds)

3. Fold b.88: Mss4-like [51315] (2 superfamilies)
   complex fold made of several coiled beta-sheets

4. Superfamily b.88.1: Mss4-like [51316] (5 families)
   duplication: tandem repeat of two similar structural motifs

5. Family b.88.1.2: Translationally controlled tumor protein TCTP (histamine-releasing factor) [63873] (2 proteins)
   contains an insertion of alpha helical hairpin; lacks zinc-binding site
   automatically mapped to Pfam PF00838

6. Protein Translationally controlled tumor protein TCTP (histamine-releasing factor) [63874] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [117337] (6 PDB entries)
   Uniprot P13693

8. Domain d3ebmd1: 3ebm D:1-172 [174820]
   Other proteins in same PDB: d3ebma2, d3ebmb2, d3ebmc2, d3ebmd2
   automated match to d2hr9a1
   mutant

Details for d3ebmd1

PDB Entry: 3ebm, 2.6 Å

PDB Description: crystal structure of human translationally controlled tumour associated protein (htctp) mutant e12v

PDB Compounds: (D:) Translationally-controlled tumor protein

SCOPe Domain Sequences for d3ebmd1:

Sequence, based on SEQRES records:

>d3ebmd1 b.88.1.2 (D:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]}
miiyrdlishdvmfsdiykireiadglclevegkmvsrtegniddsliggnasaegpege
gtestvitgvdivmnhhlqetsftkeaykkyikdymksikgkleeqrpervkpfmtgaae
qikhilanfknyqffigenmnpdgmvalldyredgvtpymiffkdglemekc

Sequence, based on observed residues (ATOM records):

>d3ebmd1 b.88.1.2 (D:1-172) Translationally controlled tumor protein TCTP (histamine-releasing factor) {Human (Homo sapiens) [TaxId: 9606]}
miiyrdlishdvmfsdiykireiadglclevegkmvstgvdivmnhhlqetsftkeaykk
yikdymksikgkleeqrpervkpfmtgaaeqikhilanfknyqffigenmnpdgmvalld
yredgvtpymiffkdglemekc

Timeline for d3ebmd1:

• d3ebmd1 first appeared in SCOPe 2.01, called d3ebmd_
  
• d3ebmd1 appears in SCOPe 2.06
  
• d3ebmd1 appears in the current release, SCOPe 2.08