SCOPe 2.05: Domain d3e41b_: 3e41 B:

Lineage for d3e41b_ (3e41 B:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (35 families)

5. Family c.52.1.19: Restriction endonuclease HincII [69525] (1 protein)
   automatically mapped to Pfam PF09226

6. Protein Restriction endonuclease HincII [69526] (1 species)

7. Species Haemophilus influenzae [TaxId:727] [69527] (19 PDB entries)
   Uniprot P17743 ! Uniprot P44413

8. Domain d3e41b_: 3e41 B: [174638]
   automated match to d1kc6a_
   protein/DNA complex; complexed with ca, na

Details for d3e41b_

PDB Entry: 3e41, 2.73 Å

PDB Description: q138f hincii bound to gtcgac and 5 mm ca2+

PDB Compounds: (B:) Type-2 restriction enzyme HindII

SCOPe Domain Sequences for d3e41b_:

Sequence, based on SEQRES records:

>d3e41b_ c.52.1.19 (B:) Restriction endonuclease HincII {Haemophilus influenzae [TaxId: 727]}
sfikpiyqdinsiligqkvkrpksgtlsghaagepfeklvykflkenlsdltfkqyeyln
dlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdq
fyelldvktrnisksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlv
cvstsfaelfksepselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqr
aismidkfvkpfkkyi

Sequence, based on observed residues (ATOM records):

>d3e41b_ c.52.1.19 (B:) Restriction endonuclease HincII {Haemophilus influenzae [TaxId: 727]}
sfikpiyqdinsiligqkvgepfeklvykflkenlsdltfkqyeylndlfmknpaiighe
aryklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdqfyelldvktrnis
ksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfkse
pselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfk
kyi

Timeline for d3e41b_:

• d3e41b_ first appeared in SCOPe 2.01
  
• d3e41b_ appears in SCOPe 2.04
  
• d3e41b_ appears in SCOPe 2.06
  
• d3e41b_ appears in the current release, SCOPe 2.08