SCOPe 2.05: Domain d3e3ya_: 3e3y A:

Lineage for d3e3ya_ (3e3y A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (35 families)

5. Family c.52.1.19: Restriction endonuclease HincII [69525] (1 protein)
   automatically mapped to Pfam PF09226

6. Protein Restriction endonuclease HincII [69526] (1 species)

7. Species Haemophilus influenzae [TaxId:727] [69527] (19 PDB entries)
   Uniprot P17743 ! Uniprot P44413

8. Domain d3e3ya_: 3e3y A: [174633]
   automated match to d1kc6a_
   protein/DNA complex; complexed with ca, na

Details for d3e3ya_

PDB Entry: 3e3y, 2.13 Å

PDB Description: q138f hincii bound to gttaac and cocrystallized with 5 mm ca2+

PDB Compounds: (A:) Type-2 restriction enzyme HindII

SCOPe Domain Sequences for d3e3ya_:

Sequence, based on SEQRES records:

>d3e3ya_ c.52.1.19 (A:) Restriction endonuclease HincII {Haemophilus influenzae [TaxId: 727]}
sfikpiyqdinsiligqkvkrpksgtlsghaagepfeklvykflkenlsdltfkqyeyln
dlfmknpaiighearyklfnsptllfllsrgkaatenwsienlfeekqndtadillvkdq
fyelldvktrnisksafapniisayklaqtcakmidnkefdlfdinylevdwelngedlv
cvstsfaelfksepselyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqr
aismidkfvkpfkkyil

Sequence, based on observed residues (ATOM records):

>d3e3ya_ c.52.1.19 (A:) Restriction endonuclease HincII {Haemophilus influenzae [TaxId: 727]}
sfikpiyqdinsiligqkvkrfeklvykflkenlsdltfkqyeylndlfmknpaiighea
ryklfnsptllfllsrgkaatenwsienlfeekndtadillvkdqfyelldvktrnisks
afapniisayklaqtcakmidnkefdlfdinylevdwelngedlvcvstsfaelfkseps
elyinwaaamqiqfhvrdldqgfngtreewaksylkhfvtqaeqraismidkfvkpfkky
il

Timeline for d3e3ya_:

• d3e3ya_ first appeared in SCOPe 2.01
  
• d3e3ya_ appears in SCOPe 2.04
  
• d3e3ya_ appears in SCOPe 2.06
  
• d3e3ya_ appears in the current release, SCOPe 2.08