SCOPe 2.01: Domain d3drdb_: 3drd B:

Lineage for d3drdb_ (3drd B:)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.4: GABA-aminotransferase-like [53417] (17 proteins)
   formerly omega-Aminoacid:pyruvate aminotransferase-like

6. Protein Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA [53438] (2 species)
   synonym: 7,8-diaminopelargonic acid synthase

7. Species Bacillus subtilis [TaxId:1423] [188929] (2 PDB entries)

8. Domain d3drdb_: 3drd B: [174207]
   automated match to d1s0aa_

Details for d3drdb_

PDB Entry: 3drd, 2.17 Å

PDB Description: Crystal Structure of 7,8 Diaminopelargonic Acid Synthase Apoenzyme in Bacillus subtilis

PDB Compounds: (B:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

SCOPe Domain Sequences for d3drdb_:

Sequence, based on SEQRES records:

>d3drdb_ c.67.1.4 (B:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Bacillus subtilis [TaxId: 1423]}
thdliekskkhlwlpftqmkdydenpliiesgtgikvkdingkeyydgfssvwlnvhghr
kkelddaikkqlgkiahstllgmtnvpatqlaetlidispkkltrvfysdsgaeameial
kmafqywknigkpekqkfiamkngyhgdtigavsvgsielfhhvygplmfesykapipyv
yrsesgdpdecrdqclrelaqlleehheeiaalsiesmvqgasgmivmpegylagvrelc
ttydvlmivdevatgfgrtgkmfacehenvqpdlmaagkgitggylpiavtfatediyka
fyddyenlktffhghsytgnqlgcavalenlalfeseniveqvaekskklhfllqdlhal
phvgdirqlgfmcgaelvrsketkepypadrrigykvslkmrelgmltrplgdviaflpp
lastaeelsemvaimkqaihevtsle

Sequence, based on observed residues (ATOM records):

>d3drdb_ c.67.1.4 (B:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Bacillus subtilis [TaxId: 1423]}
thdliekskkhlwlpftqmkdydenpliiesgtgikvkdingkeyydgfssvwlnvhghr
kkelddaikkqlgkiahstllgmtnvpatqlaetlidispkkltrvfysdsgaeameial
kmafqywknigkpekqkfiamksykapipyvyrsesgdpdecrdqclrelaqlleehhee
iaalsiesmvqgasgmivmpegylagvrelcttydvlmivdevatgfgrtgkmfacehen
vqpdlmaagkgitggylpiavtfatediykafyddyenlktffhghsytgnqlgcavale
nlalfeseniveqvaekskklhfllqdlhalphvgdirqlgfmcgaelvrsketkepypa
drrigykvslkmrelgmltrplgdviaflpplastaeelsemvaimkqaihevtsle

Timeline for d3drdb_:

• d3drdb_ is new in SCOPe 2.01-stable
  
• d3drdb_ appears in SCOPe 2.02
  
• d3drdb_ appears in the current release, SCOPe 2.08