SCOPe 2.02: Domain d3ddoa_: 3ddo A:

Lineage for d3ddoa_ (3ddo A:)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

4. Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families)
   complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8

5. Family c.56.2.1: Purine and uridine phosphorylases [53168] (7 proteins)

6. Protein Uridine phosphorylase [53176] (2 species)

7. Species Salmonella typhimurium [TaxId:90371] [117656] (23 PDB entries)
   Uniprot P0A1F6

8. Domain d3ddoa_: 3ddo A: [173837]
   automated match to d1ryza_
   complexed with po4

Details for d3ddoa_

PDB Entry: 3ddo, 1.5 Å

PDB Description: X-RAY Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with by Phosphate Ion at 1.5A Resolution

PDB Compounds: (A:) Uridine phosphorylase

SCOPe Domain Sequences for d3ddoa_:

Sequence, based on SEQRES records:

>d3ddoa_ c.56.2.1 (A:) Uridine phosphorylase {Salmonella typhimurium [TaxId: 90371]}
sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqteshavk
ivveaarrll

Sequence, based on observed residues (ATOM records):

>d3ddoa_ c.56.2.1 (A:) Uridine phosphorylase {Salmonella typhimurium [TaxId: 90371]}
sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
meewqamgvmnyemesatlltmcasqglragmvagvivnrtqkqtshavkivveaarrll

Timeline for d3ddoa_:

• d3ddoa_ first appeared in SCOPe 2.01
  
• d3ddoa_ appears in SCOPe 2.03
  
• d3ddoa_ appears in the current release, SCOPe 2.08