SCOPe 2.06: Domain d3dd1b_: 3dd1 B:

Lineage for d3dd1b_ (3dd1 B:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
   consists of two non-similar domains with 3 layers (a/b/a) each
   domain 1: parallel beta-sheet of 7 strands, order 3214567
   domain 2: parallel beta-sheet of 6 strands, order 321456

4. Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families)

5. Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 proteins)
   automatically mapped to Pfam PF00343

6. Protein Glycogen phosphorylase [53767] (3 species)
   both domains are elaborated with many insertions

7. Species Human (Homo sapiens) [TaxId:9606] [53768] (16 PDB entries)

8. Domain d3dd1b_: 3dd1 B: [173824]
   automated match to d1fa9a_
   complexed with 25d, cff, mes, mpd, nbg, plp

Details for d3dd1b_

PDB Entry: 3dd1, 2.57 Å

PDB Description: crystal structure of glycogen phophorylase complexed with an anthranilimide based inhibitor gsk254

PDB Compounds: (B:) Glycogen phosphorylase, liver form

SCOPe Domain Sequences for d3dd1b_:

Sequence, based on SEQRES records:

>d3dd1b_ c.87.1.4 (B:) Glycogen phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
nvaelkksfnrhlhftlvkdrnvattrdyyfalahtvrdhlvgrwirtqqhyydkcpkrv
yylslefymgrtlqntminlglqnacdeaiyqlgldieeleeieedaglgngglgrlaac
fldsmatlglaaygygiryeygifnqkirdgwqveeaddwlrygnpweksrpefmlpvhf
ygkvehtntgtkwidtqvvlalpydtpvpgymnntvntmrlwsarapndfnlrdfnvgdy
iqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfkaskfgstrga
gtvfdafpdqvaiqlndthpalaipelmrifvdieklpwskaweltqktfaytnhtvlpe
alerwpvdlvekllprhleiiyeinqkhldrivalfpkdvdrlrrmslieeegskrinma
hlcivgshavngvakihsdivktkvfkdfselepdkfqnktngitprrwlllcnpglael
iaekigedyvkdlsqltklhsflgddvflrelakvkqenklkfsqfleteykvkinpssm
fdvqvkriheykrqllnclhvitmynrikkdpkklfvprtviiggkaapgyhmakmiikl
itsvadvvnndpmvgsklkviflenyrvslaekvipatdlseqistagteasgtgnmkfm
lngaltigtmdganvemaeeageenlfifgmriddvaaldkkgyeakeyyealpelklvi
dqidngffspkqpdlfkdiinmlfyhdrfkvfadyeayvkcqdkvsqlymnpkawntmvl
kniaasgkfssdrtikeyaqniwnveps

Sequence, based on observed residues (ATOM records):

>d3dd1b_ c.87.1.4 (B:) Glycogen phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
nvaelkksfnrhlhftlvkdrnvattrdyyfalahtvrdhlvgrwirtqqhyydkcpkrv
yylslefymgrtlqntminlglqnacdeaiyqlgldieeleeieedaglgngglgrlaac
fldsmatlglaaygygiryeygifnqkirdgwqveeaddwlrygnpweksrpefmlpvhf
ygkvehtntgtkwidtqvvlalpydtpvpgymnntvntmrlwsarapndfnlrdfnvgdy
iqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfkaskfgstgtv
fdafpdqvaiqlndthpalaipelmrifvdieklpwskaweltqktfaytnhtvlpeale
rwpvdlvekllprhleiiyeinqkhldrivalfpkdvdrlrrmslieeegskrinmahlc
ivgshavngvakihsdivktkvfkdfselepdkfqnktngitprrwlllcnpglaeliae
kigedyvkdlsqltklhsflgddvflrelakvkqenklkfsqfleteykvkinpssmfdv
qvkriheykrqllnclhvitmynrikkdpkklfvprtviiggkaapgyhmakmiiklits
vadvvnndpmvgsklkviflenyrvslaekvipatdlseqistagteasgtgnmkfmlng
altigtmdganvemaeeageenlfifgmriddvaaldkkgyeakeyyealpelklvidqi
dngffspkqpdlfkdiinmlfyhdrfkvfadyeayvkcqdkvsqlymnpkawntmvlkni
aasgkfssdrtikeyaqniwnveps

Timeline for d3dd1b_:

• d3dd1b_ first appeared in SCOPe 2.01
  
• d3dd1b_ appears in SCOPe 2.05
  
• d3dd1b_ appears in SCOPe 2.07
  
• d3dd1b_ appears in the current release, SCOPe 2.08