Lineage for d3dd1b_ (3dd1 B:)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2142044Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
    consists of two non-similar domains with 3 layers (a/b/a) each
    domain 1: parallel beta-sheet of 7 strands, order 3214567
    domain 2: parallel beta-sheet of 6 strands, order 321456
  4. 2142045Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families) (S)
  5. 2142109Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 protein domains)
    automatically mapped to Pfam PF00343
  6. 2142110Protein Glycogen phosphorylase [53767] (3 species)
    both domains are elaborated with many insertions
  7. 2142114Species Human (Homo sapiens) [TaxId:9606] [53768] (16 PDB entries)
  8. 2142128Domain d3dd1b_: 3dd1 B: [173824]
    automated match to d1fa9a_
    complexed with 25d, cff, mes, mpd, nbg, plp

Details for d3dd1b_

PDB Entry: 3dd1 (more details), 2.57 Å

PDB Description: Crystal structure of glycogen phophorylase complexed with an anthranilimide based inhibitor GSK254
PDB Compounds: (B:) Glycogen phosphorylase, liver form

SCOPe Domain Sequences for d3dd1b_:

Sequence, based on SEQRES records: (download)

>d3dd1b_ c.87.1.4 (B:) Glycogen phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
nvaelkksfnrhlhftlvkdrnvattrdyyfalahtvrdhlvgrwirtqqhyydkcpkrv
yylslefymgrtlqntminlglqnacdeaiyqlgldieeleeieedaglgngglgrlaac
fldsmatlglaaygygiryeygifnqkirdgwqveeaddwlrygnpweksrpefmlpvhf
ygkvehtntgtkwidtqvvlalpydtpvpgymnntvntmrlwsarapndfnlrdfnvgdy
iqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfkaskfgstrga
gtvfdafpdqvaiqlndthpalaipelmrifvdieklpwskaweltqktfaytnhtvlpe
alerwpvdlvekllprhleiiyeinqkhldrivalfpkdvdrlrrmslieeegskrinma
hlcivgshavngvakihsdivktkvfkdfselepdkfqnktngitprrwlllcnpglael
iaekigedyvkdlsqltklhsflgddvflrelakvkqenklkfsqfleteykvkinpssm
fdvqvkriheykrqllnclhvitmynrikkdpkklfvprtviiggkaapgyhmakmiikl
itsvadvvnndpmvgsklkviflenyrvslaekvipatdlseqistagteasgtgnmkfm
lngaltigtmdganvemaeeageenlfifgmriddvaaldkkgyeakeyyealpelklvi
dqidngffspkqpdlfkdiinmlfyhdrfkvfadyeayvkcqdkvsqlymnpkawntmvl
kniaasgkfssdrtikeyaqniwnveps

Sequence, based on observed residues (ATOM records): (download)

>d3dd1b_ c.87.1.4 (B:) Glycogen phosphorylase {Human (Homo sapiens) [TaxId: 9606]}
nvaelkksfnrhlhftlvkdrnvattrdyyfalahtvrdhlvgrwirtqqhyydkcpkrv
yylslefymgrtlqntminlglqnacdeaiyqlgldieeleeieedaglgngglgrlaac
fldsmatlglaaygygiryeygifnqkirdgwqveeaddwlrygnpweksrpefmlpvhf
ygkvehtntgtkwidtqvvlalpydtpvpgymnntvntmrlwsarapndfnlrdfnvgdy
iqavldrnlaenisrvlypndnffegkelrlkqeyfvvaatlqdiirrfkaskfgstgtv
fdafpdqvaiqlndthpalaipelmrifvdieklpwskaweltqktfaytnhtvlpeale
rwpvdlvekllprhleiiyeinqkhldrivalfpkdvdrlrrmslieeegskrinmahlc
ivgshavngvakihsdivktkvfkdfselepdkfqnktngitprrwlllcnpglaeliae
kigedyvkdlsqltklhsflgddvflrelakvkqenklkfsqfleteykvkinpssmfdv
qvkriheykrqllnclhvitmynrikkdpkklfvprtviiggkaapgyhmakmiiklits
vadvvnndpmvgsklkviflenyrvslaekvipatdlseqistagteasgtgnmkfmlng
altigtmdganvemaeeageenlfifgmriddvaaldkkgyeakeyyealpelklvidqi
dngffspkqpdlfkdiinmlfyhdrfkvfadyeayvkcqdkvsqlymnpkawntmvlkni
aasgkfssdrtikeyaqniwnveps

SCOPe Domain Coordinates for d3dd1b_:

Click to download the PDB-style file with coordinates for d3dd1b_.
(The format of our PDB-style files is described here.)

Timeline for d3dd1b_: