SCOPe 2.06: Domain d3d4kd_: 3d4k D:

Lineage for d3d4kd_ (3d4k D:)

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families)

5. Family b.29.1.1: Legume lectins [49900] (5 proteins)

6. Protein Concanavalin A [49901] (4 species)
   natural circle permutation: the "old" N- and C-termini are linked with a peptide bond, whereas the "new" ones correspond to a cleaved loop

7. Species Jack bean (Canavalia ensiformis) [TaxId:3823] [49902] (59 PDB entries)
   Uniprot P81461

8. Domain d3d4kd_: 3d4k D: [173680]
   automated match to d1apna_
   complexed with ca, gol, h1m, man, mn

Details for d3d4kd_

PDB Entry: 3d4k, 1.8 Å

PDB Description: concanavalin a complexed to a synthetic analog of the trimannoside

PDB Compounds: (D:) Concanavalin-A

SCOPe Domain Sequences for d3d4kd_:

Sequence; same for both SEQRES and ATOM records:

>d3d4kd_ b.29.1.1 (D:) Concanavalin A {Jack bean (Canavalia ensiformis) [TaxId: 3823]}
adtivaveldtypntdigdpsyphigidiksvrskktakwnmqngkvgtahiiynsvdkr
lsavvsypnadsatvsydvdldnvlpewvrvglsastglyketntilswsftsklksnst
hetnalhfmfnqfskdqkdlilqgdattgtdgnleltrvssngspqgssvgralfyapvh
iwessavvasfeatftflikspdshpadgiaffisnidssipsgstgrllglfpdan

Timeline for d3d4kd_:

• d3d4kd_ first appeared in SCOPe 2.01
  
• d3d4kd_ appears in SCOPe 2.05
  
• d3d4kd_ appears in SCOPe 2.07
  
• d3d4kd_ appears in the current release, SCOPe 2.08