SCOPe 2.06: Domain d3d3ca_: 3d3c A:

Lineage for d3d3ca_ (3d3c A:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.79: NusB-like [48012] (1 superfamily)
   6 helices: bundle; one central helix is surrounded by 5 others

4. Superfamily a.79.1: NusB-like [48013] (3 families)

5. Family a.79.1.1: Antitermination factor NusB [48014] (2 proteins)
   automatically mapped to Pfam PF01029

6. Protein automated matches [190997] (1 species)
   not a true protein

7. Species Escherichia coli K-12 [TaxId:83333] [188726] (3 PDB entries)

8. Domain d3d3ca_: 3d3c A: [173659]
   automated match to d1ey1a_
   protein/RNA complex

Details for d3d3ca_

PDB Entry: 3d3c, 2.6 Å

PDB Description: structural and functional analysis of the e. coli nusb-s10 transcription antitermination complex.

PDB Compounds: (A:) N utilization substance protein B

SCOPe Domain Sequences for d3d3ca_:

Sequence; same for both SEQRES and ATOM records:

>d3d3ca_ a.79.1.1 (A:) automated matches {Escherichia coli K-12 [TaxId: 83333]}
epaarrrarecavqalyswqlsqndiadveyqflaeqdvkdvdvlyfrellagvatntay
ldglmkpylsrlleelgqvekavlrialyelskrsdvpykvaineaielaksfgaedshk
fvngvldkaapvirpnkk

Timeline for d3d3ca_:

• d3d3ca_ first appeared in SCOPe 2.01
  
• d3d3ca_ appears in SCOPe 2.05
  
• d3d3ca_ appears in SCOPe 2.07
  
• d3d3ca_ appears in the current release, SCOPe 2.08