Class b: All beta proteins [48724] (180 folds) |
Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily) barrel, closed; n=6, S=8; greek-key duplication: consists of two domains of the same fold |
Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families) |
Family b.47.1.4: Viral cysteine protease of trypsin fold [50603] (5 proteins) |
Protein Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979] (8 species) contains an extra alpha-helical domain |
Species Human coronavirus [TaxId:443239] [188597] (6 PDB entries) |
Domain d3d23a1: 3d23 A:1-300 [173627] Other proteins in same PDB: d3d23a2, d3d23b2 automated match to d1uj1b_ protein/RNA complex has additional subdomain(s) that are not in the common domain |
PDB Entry: 3d23 (more details), 2.5 Å
SCOPe Domain Sequences for d3d23a1:
Sequence, based on SEQRES records: (download)
>d3d23a1 b.47.1.4 (A:1-300) Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) {Human coronavirus [TaxId: 443239]} sgivkmvsptskiepcivsvtygsmtlnglwlddkvycprhvicsssnmnepdysallcr vtlgdftimsgrmsltvvsyqmqgcqlvltvslqnpytpkytfgnvkpgetftvlaayng rpqgafhvtmrssytikgsflcgscgsvgyvltgdsvkfvymhqlelstgchtgtdftgn fygpyrdaqvvqlpvkdyvqtvnviawlyaailnncawfvqndvcstedfnvwamangfs qvkadlvldalasmtgvsietllaaikrlymgfqgrqilgsctfedelapsdvyqqlagv
>d3d23a1 b.47.1.4 (A:1-300) Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) {Human coronavirus [TaxId: 443239]} sgivkmvsptskiepcivsvtygsmtlnglwlddkvycprhvicsmnepdysallcrvtl gdftimsgrmsltvvsyqmqgcqlvltvslqnpytpkytfgnvkpgetftvlaayngrpq gafhvtmrssytikgsflcgscgsvgyvltgdsvkfvymhqlelstgchtgtdftgnfyg pyrdaqvvqlpvkdyvqtvnviawlyaailnncawfvqndvcstedfnvwamangfsqvk adlvldalasmtgvsietllaaikrlymgfqgrqilgsctfedelapsdvyqqlagv
Timeline for d3d23a1:
View in 3D Domains from other chains: (mouse over for more information) d3d23b1, d3d23b2, d3d23c_, d3d23d_ |