SCOPe 2.08: Domain d3cvna_: 3cvn A:

Lineage for d3cvna_ (3cvn A:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.118: alpha-alpha superhelix [48370] (28 superfamilies)
   multihelical; 2 (curved) layers: alpha/alpha; right-handed superhelix

4. Superfamily a.118.8: TPR-like [48452] (11 families)

5. Family a.118.8.1: Tetratricopeptide repeat (TPR) [48453] (21 proteins)
   this is a repeat family; one repeat unit is 1zb1 A:166-231 found in domain

6. Protein Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) [48462] (2 species)

7. Species Trypanosome (Trypanosoma brucei) [TaxId:5691] [63617] (6 PDB entries)

8. Domain d3cvna_: 3cvn A: [173506]
   automated match to d1fcha_
   complexed with edo
   applies to all domains of a family if the common domain is composed of a different number of small repeating units

Details for d3cvna_

PDB Entry: 3cvn, 2 Å

PDB Description: structure of peroxisomal targeting signal 1 (pts1) binding domain of trypanosoma brucei peroxin 5 (tbpex5)complexed to t. brucei glyceraldehyde-3-phosphate dehydrogenase (gapdh) pts1 peptide

PDB Compounds: (A:) Peroxisome targeting signal 1 receptor

SCOPe Domain Sequences for d3cvna_:

Sequence, based on SEQRES records:

>d3cvna_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
tdypfeannpymyhenpmeeglsmlklanlaeaalafeavcqaapereeawrslgltqae
nekdglaiialnharmldpkdiavhaalavshtnehnanaalaslrawllsqpqyeqlgs
vnlqadvdiddlnvqsedfffaapneyrecrtllhaalemnpndaqlhaslgvlynlsnn
ydsaaanlrravelrpddaqlwnklgatlangnrpqealdaynraldinpgyvrvmynma
vsysnmsqydlaakqlvraiymqvggttptgeasreatrsmwdffrmllnvmnrpdlvel
tyaqnvepfakefglqsmll

Sequence, based on observed residues (ATOM records):

>d3cvna_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosome (Trypanosoma brucei) [TaxId: 5691]}
tdypfeannpymyhenpmeeglsmlklanlaeaalafeavcqaapereeawrslgltqae
nekdglaiialnharmldpkdiavhaalavshtnehnanaalaslrawllsqpqyeqlgs
vnlfffaapneyrecrtllhaalemnpndaqlhaslgvlynlsnnydsaaanlrravelr
pddaqlwnklgatlangnrpqealdaynraldinpgyvrvmynmavsysnmsqydlaakq
lvraiymqvggeasreatrsmwdffrmllnvmnrpdlveltyaqnvepfakefglqsmll

Timeline for d3cvna_:

• d3cvna_ first appeared in SCOPe 2.01
  
• d3cvna_ appears in SCOPe 2.07