SCOPe 2.08: Domain d3cp9a1: 3cp9 A:817-1171

Lineage for d3cp9a1 (3cp9 A:817-1171)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
   consists of two alpha+beta domains, C-terminal domain is mostly alpha helical

4. Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families)
   shares functional and structural similarities with the ATP-grasp fold and PIPK

5. Family d.144.1.7: Protein kinases, catalytic subunit [88854] (66 proteins)
   members organized in the groups and subfamiles specified by the comments

6. Protein Vascular endothelial growth factor receptor 2 (kdr) [56160] (1 species)
   PTK group; PDGFR/VEGFR subfamily; membrane spanning protein tyrosine kinase

7. Species Human (Homo sapiens) [TaxId:9606] [56161] (30 PDB entries)

8. Domain d3cp9a1: 3cp9 A:817-1171 [173385]
   Other proteins in same PDB: d3cp9a2
   automated match to d1vr2a_
   complexed with c19

Details for d3cp9a1

PDB Entry: 3cp9, 2.5 Å

PDB Description: crystal structure of the vegfr2 kinase domain in complex with a pyridone inhibitor

PDB Compounds: (A:) Vascular endothelial growth factor receptor 2

SCOPe Domain Sequences for d3cp9a1:

Sequence, based on SEQRES records:

>d3cp9a1 d.144.1.7 (A:817-1171) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
aerlpydaskwefprdrlklgkplgrgafgqvieadafgidktatcrtvavkmlkegath
sehralmselkilihighhlnvvnllgactkpggplmvitefckfgnlstylrskrnefv
pykvapedlykdfltlehlicysfqvakgmeflasrkcihrdlaarnillseknvvkicd
fglardiykdpdyvrkgdarlplkwmapetifdrvytiqsdvwsfgvllweifslgaspy
pgvkideefcrrlkegtrmrapdyttpemyqtmldcwhgepsqrptfselvehlgnllqa
naqqd

Sequence, based on observed residues (ATOM records):

>d3cp9a1 d.144.1.7 (A:817-1171) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
aerlpydaskwefprdrlklgkplqvieadafgidktatcrtvavkmlkegathsehral
mselkilihighhlnvvnllgactkpggplmvitefckfgnlstylrskrnefvpykvap
edlykdfltlehlicysfqvakgmeflasrkcihrdlaarnillseknvvkicdfglplk
wmapetifdrvytiqsdvwsfgvllweifslgaspypgvkideefcrrlkegtrmrapdy
ttpemyqtmldcwhgepsqrptfselvehlgnllqanaqqd

Timeline for d3cp9a1:

• d3cp9a1 first appeared in SCOPe 2.01, called d3cp9a_
  
• d3cp9a1 appears in SCOPe 2.07