Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds) |
Fold e.8: DNA/RNA polymerases [56671] (1 superfamily) divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members |
Superfamily e.8.1: DNA/RNA polymerases [56672] (9 families) "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain |
Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins) |
Protein Viral RNA polymerase [56695] (17 species) |
Species Hepatitis C virus [TaxId:11103] [56697] (72 PDB entries) |
Domain d3cj5b1: 3cj5 B:2-564 [173275] Other proteins in same PDB: d3cj5a2, d3cj5b2 automated match to d1nb4a_ protein/RNA complex; complexed with sx6 |
PDB Entry: 3cj5 (more details), 1.92 Å
SCOPe Domain Sequences for d3cj5b1:
Sequence, based on SEQRES records: (download)
>d3cj5b1 e.8.1.4 (B:2-564) Viral RNA polymerase {Hepatitis C virus [TaxId: 11103]} msytwtgalitpcaaeesklpinalsnsllrhhnmvyattsrsaglrqkkvtfdrlqvld dhyrdvlkemkakastvkakllsveeackltpphsakskfgygakdvrnlsskavnhihs vwkdlledtvtpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvvst lpqvvmgssygfqyspgqrveflvntwkskknpmgfsydtrcfdstvtendirveesiyq ccdlapearqaikslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkasa acraaklqdctmlvngddlvvicesagtqedaaslrvfteamtrysappgdppqpeydle litscssnvsvahdasgkrvyyltrdpttplaraawetarhtpvnswlgniimyaptlwa rmilmthffsillaqeqlekaldcqiygacysiepldlpqiierlhglsafslhsyspge inrvasclrklgvpplrvwrhrarsvrarllsqggraatcgkylfnwavktklkltpipa asrldlsgwfvagysggdiyhsl
>d3cj5b1 e.8.1.4 (B:2-564) Viral RNA polymerase {Hepatitis C virus [TaxId: 11103]} msytwtgalitpcaaeesklpinalsnsllrhhnmvyattsrsaglrqkkvtfdrlqvld dhyrdvlkemkakastvkakllsveeackltpphsakskfgygakdvrnlsskavnhihs vwkdlledtvtpidttimaknevfcvqpegrkparlivfpdlgvrvcekmalydvvstlp qvvmgssygfqyspgqrveflvntwkskknpmgfsydtrcfdstvtendirveesiyqcc dlapearqaikslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkasaac raaklqdctmlvngddlvvicesagtqedaaslrvfteamtrysappgdppqpeydleli tscssnvsvahdasgkrvyyltrdpttplaraawetarhtpvnswlgniimyaptlwarm ilmthffsillaqeqlekaldcqiygacysiepldlpqiierlhglsafslhsyspgein rvasclrklgvpplrvwrhrarsvrarllsqggraatcgkylfnwavktklkltpipaas rldlsgwfvagysggdiyhsl
Timeline for d3cj5b1: