SCOPe 2.06: Domain d3bixa1: 3bix A:52-638

Lineage for d3bixa1 (3bix A:52-638)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest

4. Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families)
   many members have left-handed crossover connection between strand 8 and additional strand 9

5. Family c.69.1.0: automated matches [191404] (1 protein)
   not a true family

6. Protein automated matches [190543] (91 species)
   not a true protein

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [188292] (8 PDB entries)

8. Domain d3bixa1: 3bix A:52-638 [172647]
   Other proteins in same PDB: d3bixa2, d3bixb2, d3bixc2, d3bixd2
   automated match to d1j06a_
   complexed with edo, nag, ni

Details for d3bixa1

PDB Entry: 3bix, 1.8 Å

PDB Description: crystal structure of the extracellular esterase domain of neuroligin-1

PDB Compounds: (A:) Neuroligin-1

SCOPe Domain Sequences for d3bixa1:

Sequence, based on SEQRES records:

>d3bixa1 c.69.1.0 (A:52-638) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
dplvttnfgkirgikkelnneilgpviqflgvpyaapptgehrfqppeppspwsdirnat
qfapvcpqniidgrlpevmlpvwftnnldvvssyvqdqsedclylniyvpteddirdsgg
pkpvmvyihggsymegtgnlydgsvlasygnvivitvnyrlgvlgflstgdqaakgnygl
ldliqalrwtsenigffggdplritvfgsgaggscvnlltlshysekglfqraiaqsgta
lsswavsfqpakyarilatkvgcnvsdtvelveclqkkpykelvdqdvqparyhiafgpv
idgdvipddpqilmeqgeflnydimlgvnqgeglkfvenivdsddgvsasdfdfavsnfv
dnlygypegkdvlretikfmytdwadrhnpetrrktllalftdhqwvapavatadlhsnf
gsptyfyafyhhcqtdqvpawadaahgdevpyvlgipmigptelfpcnfskndvmlsavv
mtywtnfaktgdpnqpvpqdtkfihtkpnrfeevawtrysqkdqlylhiglkprvkehyr
ankvnlwlelvphlhnlnd

Sequence, based on observed residues (ATOM records):

>d3bixa1 c.69.1.0 (A:52-638) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
dplvttnfgkirgikkelnneilgpviqflgvpyaapptgehrfqppeppspwsdirnat
qfapvcpqniidgrlpevmlpvwftnnldvvssyvqdqsedclylniyvptgpkpvmvyi
hggsymegtgnlydgsvlasygnvivitvnyrlgvlgflstgdqaakgnyglldliqalr
wtsenigffggdplritvfgsgaggscvnlltlshysekglfqraiaqsgtalsswavsf
qpakyarilatkvgcnvsdtvelveclqkkpykelvdqdvqparyhiafgpvidgdvipd
dpqilmeqgeflnydimlgvnqgeglkfvenivdsddgvsasdfdfavsnfvdnlygype
gkdvlretikfmytdwadrhnpetrrktllalftdhqwvapavatadlhsnfgsptyfya
fyhhcqtdqvpawadaahgdevpyvlgipmigptelfpcnfskndvmlsavvmtywtnfa
ktgdpnqpvpqdtkfihtkpnrfeevawtrysqkdqlylhiglkprvkehyrankvnlwl
elvphlhnlnd

Timeline for d3bixa1:

• d3bixa1 first appeared in SCOPe 2.01, called d3bixa_
  
• d3bixa1 was called d3bixa_ in SCOPe 2.05
  
• d3bixa1 appears in SCOPe 2.07
  
• d3bixa1 appears in the current release, SCOPe 2.08