Lineage for d3b8qa_ (3b8q A:)

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1671717Fold d.144: Protein kinase-like (PK-like) [56111] (1 superfamily)
    consists of two alpha+beta domains, C-terminal domain is mostly alpha helical
  4. 1671718Superfamily d.144.1: Protein kinase-like (PK-like) [56112] (8 families) (S)
    shares functional and structural similarities with the ATP-grasp fold and PIPK
  5. 1671838Family d.144.1.7: Protein kinases, catalytic subunit [88854] (64 proteins)
    members organized in the groups and subfamiles specified by the comments
  6. 1673953Protein Vascular endothelial growth factor receptor 2 (kdr) [56160] (1 species)
    PTK group; PDGFR/VEGFR subfamily; membrane spanning protein tyrosine kinase
  7. 1673954Species Human (Homo sapiens) [TaxId:9606] [56161] (20 PDB entries)
  8. 1673979Domain d3b8qa_: 3b8q A: [172496]
    automated match to d1vr2a_
    complexed with 900

Details for d3b8qa_

PDB Entry: 3b8q (more details), 2.75 Å

PDB Description: crystal structure of the vegfr2 kinase domain in complex with a naphthamide inhibitor
PDB Compounds: (A:) Vascular endothelial growth factor receptor 2

SCOPe Domain Sequences for d3b8qa_:

Sequence, based on SEQRES records: (download)

>d3b8qa_ d.144.1.7 (A:) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
erlpydaskwefprdrlklgkplgrgafgqvieadafgidktatcrtvavkmlkegaths
ehralmselkilihighhlnvvnllgactkpggplmvitefckfgnlstylrskrnefvp
ykvapedlykdfltlehlicysfqvakgmeflasrkcihrdlaarnillseknvvkicdf
glardiykdpdyvrkgdarlplkwmapetifdrvytiqsdvwsfgvllweifslgaspyp
gvkideefcrrlkegtrmrapdyttpemyqtmldcwhgepsqrptfselvehlgnllqan
aqqdrhhhhhh

Sequence, based on observed residues (ATOM records): (download)

>d3b8qa_ d.144.1.7 (A:) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
erlpydaskwefprdrlklgkplgrgafgqvieadafgidktatcrtvavkmlkegaths
ehralmselkilihighhlnvvnllgactkpggplmvitefckfgnlstylrskrnefvp
ykvapedlykdfltlehlicysfqvakgmeflasrkcihrdlaarnillseknvvkicdf
lplkwmapetifdrvytiqsdvwsfgvllweifslgaspypgvkideefcrrlkegtrmr
apdyttpemyqtmldcwhgepsqrptfselvehlgnllqanaqqdrhhhhhh

SCOPe Domain Coordinates for d3b8qa_:

Click to download the PDB-style file with coordinates for d3b8qa_.
(The format of our PDB-style files is described here.)

Timeline for d3b8qa_: