SCOPe 2.06: Domain d3a4sb1: 3a4s B:1-158

Lineage for d3a4sb1 (3a4s B:1-158)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.20: UBC-like [54494] (1 superfamily)
   alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2

4. Superfamily d.20.1: UBC-like [54495] (5 families)

5. Family d.20.1.1: UBC-related [54496] (7 proteins)

6. Protein Ubiquitin conjugating enzyme, UBC [54497] (33 species)

7. Species Human (Homo sapiens), ubc9 [TaxId:9606] [54503] (29 PDB entries)
   identical sequence in many other species

8. Domain d3a4sb1: 3a4s B:1-158 [171725]
   Other proteins in same PDB: d3a4sb2, d3a4sc_, d3a4sd_
   automated match to d1kpsa_
   protein/RNA complex

Details for d3a4sb1

PDB Entry: 3a4s, 2.7 Å

PDB Description: The crystal structure of the SLD2:Ubc9 complex

PDB Compounds: (B:) SUMO-conjugating enzyme UBC9

SCOPe Domain Sequences for d3a4sb1:

Sequence, based on SEQRES records:

>d3a4sb1 d.20.1.1 (B:1-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
msgialsrlaqerkawrkdhpfgfvavptknpdgtmnlmnwecaipgkkgtpwegglfkl
rmlfkddypssppkckfepplfhpnvypsgtvclsileedkdwrpaitikqillgiqell
nepniqdpaqaeaytiycqnrveyekrvraqakkfaps

Sequence, based on observed residues (ATOM records):

>d3a4sb1 d.20.1.1 (B:1-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
msgialsrlaqerkawrkdhpfgfvavptktmnlmnwecaipgkkgtpwegglfklrmlf
kddypssppkckfepplfhpnvypsgtvclsileedkdwrpaitikqillgiqellnepn
iqdpaqaeaytiycqnrveyekrvraqakkfaps

Timeline for d3a4sb1:

• d3a4sb1 first appeared in SCOPe 2.01, called d3a4sb_
  
• d3a4sb1 was called d3a4sb_ in SCOPe 2.05
  
• d3a4sb1 appears in SCOPe 2.07
  
• d3a4sb1 appears in the current release, SCOPe 2.08