SCOPe 2.05: Domain d3a4sa_: 3a4s A:

Lineage for d3a4sa_ (3a4s A:)

1. Root: SCOPe 2.05

2. Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

3. Fold d.20: UBC-like [54494] (1 superfamily)
   alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2

4. Superfamily d.20.1: UBC-like [54495] (5 families)

5. Family d.20.1.1: UBC-related [54496] (7 proteins)

6. Protein Ubiquitin conjugating enzyme, UBC [54497] (33 species)

7. Species Human (Homo sapiens), ubc9 [TaxId:9606] [54503] (22 PDB entries)
   identical sequence in many other species

8. Domain d3a4sa_: 3a4s A: [171724]
   Other proteins in same PDB: d3a4sc_, d3a4sd_
   automated match to d1kpsa_
   protein/RNA complex

Details for d3a4sa_

PDB Entry: 3a4s, 2.7 Å

PDB Description: The crystal structure of the SLD2:Ubc9 complex

PDB Compounds: (A:) SUMO-conjugating enzyme UBC9

SCOPe Domain Sequences for d3a4sa_:

Sequence, based on SEQRES records:

>d3a4sa_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
gialsrlaqerkawrkdhpfgfvavptknpdgtmnlmnwecaipgkkgtpwegglfklrm
lfkddypssppkckfepplfhpnvypsgtvclsileedkdwrpaitikqillgiqellne
pniqdpaqaeaytiycqnrveyekrvraqakkfaps

Sequence, based on observed residues (ATOM records):

>d3a4sa_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
gialsrlaqerkawrkdhpfgfvavptkpdgtmnlmnwecaipgkkgtpwegglfklrml
fkddypssppkckfepplfhpnvypsgtvclsileedkdwrpaitikqillgiqellnep
niqdpaqaeaytiycqnrveyekrvraqakkfaps

Timeline for d3a4sa_:

• d3a4sa_ first appeared in SCOPe 2.01
  
• d3a4sa_ appears in SCOPe 2.04
  
• d3a4sa_ appears in SCOPe 2.06
  
• d3a4sa_ appears in the current release, SCOPe 2.08