SCOPe 2.04: Domain d2zxxf_: 2zxx F:

Lineage for d2zxxf_ (2zxx F:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.52: DNA replication factor Cdt1 [109686] (1 protein)
   automatically mapped to Pfam PF08839

6. Protein DNA replication factor Cdt1 [109687] (1 species)

7. Species Mouse (Mus musculus) [TaxId:10090] [109688] (1 PDB entry)
   Uniprot Q8R4E9 179-365

8. Domain d2zxxf_: 2zxx F: [171601]
   Other proteins in same PDB: d2zxxa_, d2zxxb_, d2zxxd_, d2zxxe_
   protein/DNA complex

Details for d2zxxf_

PDB Entry: 2zxx, 2.8 Å

PDB Description: Crystal structure of Cdt1/geminin complex

PDB Compounds: (F:) DNA replication factor Cdt1

SCOPe Domain Sequences for d2zxxf_:

Sequence, based on SEQRES records:

>d2zxxf_ a.4.5.52 (F:) DNA replication factor Cdt1 {Mouse (Mus musculus) [TaxId: 10090]}
kapayqrfhalaqpglpglvlpykyqvlvemfrsmdtivsmlhnrsetvtfakvkqgvqe
mmrkrfeernvgqiktvyptsyrfrqecnvptfkdsikrsdyqltiepllgqeaggatql
tatcllqrrqvfrqnlvervkeqhkvflaslnppmavpddqltrwhprfnvdevpdiepa
elpqppv

Sequence, based on observed residues (ATOM records):

>d2zxxf_ a.4.5.52 (F:) DNA replication factor Cdt1 {Mouse (Mus musculus) [TaxId: 10090]}
kapayqrfhalaqpglpglvlpykyqvlvemfrsmdtivsmlhnrsetvtfakvkqgvqe
mmrkrfeernvgqiktvyptsyrfrqecnvptfkdsikrsdyqltiepllgqeatqltat
cllqrrqvfrqnlvervkeqhkvflaslnppmavpddqltrwhprfnvdevpdiepaelp
qppv

Timeline for d2zxxf_:

• d2zxxf_ first appeared in SCOPe 2.01
  
• d2zxxf_ appears in SCOPe 2.03
  
• d2zxxf_ appears in SCOPe 2.05
  
• d2zxxf_ appears in the current release, SCOPe 2.08