SCOPe 2.05: Domain d2ztvd_: 2ztv D:

Lineage for d2ztvd_ (2ztv D:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 proteins)
   also known as short-chain dehydrogenases and SDR family
   parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

6. Protein automated matches [190085] (47 species)
   not a true protein

7. Species Pseudomonas fragi [TaxId:296] [188080] (6 PDB entries)

8. Domain d2ztvd_: 2ztv D: [171517]
   automated match to d1wmba1
   complexed with gol, mg, nad

Details for d2ztvd_

PDB Entry: 2ztv, 1.95 Å

PDB Description: The binary complex of D-3-hydroxybutyrate dehydrogenase with NAD+

PDB Compounds: (D:) D(-)-3-hydroxybutyrate dehydrogenase

SCOPe Domain Sequences for d2ztvd_:

Sequence, based on SEQRES records:

>d2ztvd_ c.2.1.2 (D:) automated matches {Pseudomonas fragi [TaxId: 296]}
mlkgkvavvtgstsgiglgiatalaaqgadivlngfgdaaeiekvraglaaqhgvkvlyd
gadlskgeavrglvdnavrqmgridilvnnagiqhtaliedfptekwdailalnlsavfh
gtaaalphmkkqgfgriiniasahglvasanksayvaakhgvvgftkvtaletagqgita
naicpgwvrtplvekqisalaekngvdqetaarellsekqpslqfvtpeqlggtavflas
daaaqitgttvsvdggwtar

Sequence, based on observed residues (ATOM records):

>d2ztvd_ c.2.1.2 (D:) automated matches {Pseudomonas fragi [TaxId: 296]}
mlkgkvavvtgstsgiglgiatalaaqgadivlngfgdaaeiekvraglaaqhgvkvlyd
gadlskgeavrglvdnavrqmgridilvnnagiqhtaliedfptekwdailalnlsavfh
gtaaalphmkkqgfgriiniasahglvasanksayvaakhgvvgftkvtaletagqgita
naicpgwvrtplvekqisvdqetaarellsekqpslqfvtpeqlggtavflasdaaaqit
gttvsvdggwtar

Timeline for d2ztvd_:

• d2ztvd_ first appeared in SCOPe 2.01
  
• d2ztvd_ appears in SCOPe 2.04
  
• d2ztvd_ appears in SCOPe 2.06
  
• d2ztvd_ appears in the current release, SCOPe 2.08