SCOPe 2.05: Domain d2zlya_: 2zly A:

Lineage for d2zlya_ (2zly A:)

1. Root: SCOPe 2.05

2. Class e: Multi-domain proteins (alpha and beta) [56572] (68 folds)

3. Fold e.3: beta-lactamase/transpeptidase-like [56600] (1 superfamily)
   contains a cluster of helices and an alpha+beta sandwich

4. Superfamily e.3.1: beta-lactamase/transpeptidase-like [56601] (4 families)

5. Family e.3.1.1: beta-Lactamase/D-ala carboxypeptidase [56602] (19 proteins)

6. Protein 6-aminohexanoate-dimer hydrolase NylC [160972] (1 species)
   NylB'

7. Species Flavobacterium sp. [TaxId:239] [160973] (11 PDB entries)
   Uniprot P07062 5-392

8. Domain d2zlya_: 2zly A: [171368]
   automated match to d1wyba1
   complexed with gol, mes, so4; mutant

Details for d2zlya_

PDB Entry: 2zly, 1.58 Å

PDB Description: structure of 6-aminohexanoate-dimer hydrolase, d370y mutant

PDB Compounds: (A:) 6-aminohexanoate-dimer hydrolase

SCOPe Domain Sequences for d2zlya_:

Sequence, based on SEQRES records:

>d2zlya_ e.3.1.1 (A:) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]}
stgqhparypgaaageptldswqepphnrwafahlgemvpsaavsrrpvnapghalarlg
aiaaqlpdleqrleqtytdaflvlrgtevvaeyyragfapddrhllmsvskslcgtvvga
lvdegridpaqpvteyvpelagsvydgpsvlqvldmqisidynedyvdpasevqthgrsa
gwrtrrhgdpadtyeflttlrgdgstgefqycsantdvlawivervtglryvealstylw
akldadrdatitvdttgfgfahggvsctardlarvgrmmldggvapggrvvsedwvrrvl
aggsheamtdkgftntfpdgsytrqwwctgnergnvsgigihgqnlwldpltdsvivkls
swpdpytehwhrlqngilldvsraldav

Sequence, based on observed residues (ATOM records):

>d2zlya_ e.3.1.1 (A:) 6-aminohexanoate-dimer hydrolase NylC {Flavobacterium sp. [TaxId: 239]}
stgqhparypgaaageptldswqepphnrwafahlgemvpsaavsrrpghalarlgaiaa
qlpdleqrleqtytdaflvlrgtevvaeyyragfapddrhllmsvskslcgtvvgalvde
gridpaqpvteyvpelagsvydgpsvlqvldmqisidynedpasevqthgrsagwrtrrh
gdpadtyeflttlrgdgstgefqycsantdvlawivervtglryvealstylwakldadr
datitvdttgfgfahggvsctardlarvgrmmldggvapggrvvsedwvrrvlaggshea
mtdkgftntfpdgsytrqwwctgnergnvsgigihgqnlwldpltdsvivklsswpdpyt
ehwhrlqngilldvsraldav

Timeline for d2zlya_:

• d2zlya_ first appeared in SCOPe 2.01
  
• d2zlya_ appears in SCOPe 2.04
  
• d2zlya_ appears in SCOPe 2.06
  
• d2zlya_ appears in the current release, SCOPe 2.08