SCOPe 2.08: Domain d2zfxa_: 2zfx A:

Lineage for d2zfxa_ (2zfx A:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [187147] (4 PDB entries)

8. Domain d2zfxa_: 2zfx A: [171200]
   automated match to d1rkha_
   protein/DNA complex; complexed with yr3

Details for d2zfxa_

PDB Entry: 2zfx, 1.99 Å

PDB Description: crystal structure of the rat vitamin d receptor ligand binding domain complexed with yr301 and a synthetic peptide containing the nr2 box of drip 205

PDB Compounds: (A:) Vitamin D3 receptor

SCOPe Domain Sequences for d2zfxa_:

Sequence, based on SEQRES records:

>d2zfxa_ a.123.1.1 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klseeqqhiiailldahhktydptyadfrdfrppvrmdgstgsvtldlsplsmlphladl
vsysiqkvigfakmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdy
kydvtdvskaghtlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklve
aiqdrlsntlqtyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmk
ltplvlevfgne

Sequence, based on observed residues (ATOM records):

>d2zfxa_ a.123.1.1 (A:) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}
klseeqqhiiailldahhktydptyadfrdfrppvrmsplsmlphladlvsysiqkvigf
akmipgfrdltsddqivllkssaievimlrsnqsftmddmswdcgsqdykydvtdvskag
htlelieplikfqvglkklnlheeehvllmaicivspdrpgvqdaklveaiqdrlsntlq
tyircrhpppgshqlyakmiqkladlrslneehskqyrslsfqpensmkltplvlevfgn
e

Timeline for d2zfxa_:

• d2zfxa_ first appeared in SCOPe 2.01
  
• d2zfxa_ appears in SCOPe 2.07