SCOPe 2.06: Domain d2z1wa_: 2z1w A:

Lineage for d2z1wa_ (2z1w A:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:542] [51716] (113 PDB entries)
   Uniprot P28720

8. Domain d2z1wa_: 2z1w A: [170987]
   automated match to d1q2ra_
   protein/RNA complex; complexed with bdi, gol, zn; mutant

Details for d2z1wa_

PDB Entry: 2z1w, 1.63 Å

PDB Description: trna guanine transglycosylase tgt e235q mutant in complex with bdi (2- butyl-5,6-dihydro-1h-imidazo[4,5-d]pyridazine-4,7-dione)

PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d2z1wa_:

Sequence, based on SEQRES records:

>d2z1wa_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshldg
srhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrk
eqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgqgqdemfrvldfsvpm
lpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsed
lkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrf
sqfaqdfraryfa

Sequence, based on observed residues (ATOM records):

>d2z1wa_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
rprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilgn
tyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmsltkqseegvtfkmlspersi
eiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeqaenaalfgi
qqgsvfenlrqqsadalaeigfdgyavgglavgqgqdemfrvldfsvpmlpddkphylmg
vgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlkpldsechca
vcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsqfaqdfrary
fa

Timeline for d2z1wa_:

• d2z1wa_ first appeared in SCOPe 2.01
  
• d2z1wa_ appears in SCOPe 2.05
  
• d2z1wa_ appears in SCOPe 2.07
  
• d2z1wa_ appears in the current release, SCOPe 2.08