Lineage for d2z1mc_ (2z1m C:)

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1576363Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 1576364Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 1576689Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
  6. 1577849Protein automated matches [190085] (43 species)
    not a true protein
  7. 1577873Species Aquifex aeolicus [TaxId:224324] [188271] (2 PDB entries)
  8. 1577876Domain d2z1mc_: 2z1m C: [170977]
    automated match to d1t2aa_
    complexed with gdp, ndp

Details for d2z1mc_

PDB Entry: 2z1m (more details), 2 Å

PDB Description: Crystal Structure of GDP-D-Mannose Dehydratase from Aquifex aeolicus VF5
PDB Compounds: (C:) GDP-D-mannose dehydratase

SCOPe Domain Sequences for d2z1mc_:

Sequence, based on SEQRES records: (download)

>d2z1mc_ c.2.1.2 (C:) automated matches {Aquifex aeolicus [TaxId: 224324]}
gkralitgirgqdgaylaklllekgyevygadrrsgefaswrlkelgiendvkiihmdll
efsniirtiekvqpdevynlaaqsfvgvsfeqpiltaevdaigvlrilealrtvkpdtkf
yqastsemfgkvqeipqtektpfyprspyavaklfghwitvnyreaynmfacsgilfnhe
splrgiefvtrkityslarikyglqdklvlgnlnakrdwgyapeyveamwlmmqqpepdd
yviatgethtvrefvekaakiagfdiewvgeginekgidrntgkvivevseeffrpaevd
ilvgnpekamkklgwkprttfdelveimmeadlkrvrdrevsv

Sequence, based on observed residues (ATOM records): (download)

>d2z1mc_ c.2.1.2 (C:) automated matches {Aquifex aeolicus [TaxId: 224324]}
gkralitgirgqdgaylaklllekgyevygadswrlkelgiendvkiihmdllefsniir
tiekvqpdevynlaaqsfvgvsfeqpiltaevdaigvlrilealrtvkpdtkfyqastse
mfgkvqeipqtektpfyprspyavaklfghwitvnyreaynmfacsgilfnhesplrgie
fvtrkityslarikyglqdklvlgnlnakrdwgyapeyveamwlmmqqpepddyviatge
thtvrefvekaakiagfdiewvgeginekgidrntgkvivevseeffrpaevdilvgnpe
kamkklgwkprttfdelveimmeadlkrvrdrevsv

SCOPe Domain Coordinates for d2z1mc_:

Click to download the PDB-style file with coordinates for d2z1mc_.
(The format of our PDB-style files is described here.)

Timeline for d2z1mc_: