SCOPe 2.03: Domain d2yiid_: 2yii D:

Lineage for d2yiid_ (2yii D:)

1. Root: SCOPe 2.03

2. Class a: All alpha proteins [46456] (284 folds)

3. Fold a.127: L-aspartase-like [48556] (1 superfamily)
   multihelical, consists of three all-alpha domains

4. Superfamily a.127.1: L-aspartase-like [48557] (3 families)

5. Family a.127.1.0: automated matches [191431] (1 protein)
   not a true family

6. Protein automated matches [190621] (10 species)
   not a true protein

7. Species Taxus wallichiana [TaxId:29808] [189805] (2 PDB entries)

8. Domain d2yiid_: 2yii D: [170808]
   automated match to d1w27a_
   complexed with bme, fmt, gol

Details for d2yiid_

PDB Entry: 2yii, 2.18 Å

PDB Description: manipulating the regioselectivity of phenylalanine aminomutase: new insights into the reaction mechanism of mio-dependent enzymes from structure-guided directed evolution

PDB Compounds: (D:) phenylalanine ammonia-lyase

SCOPe Domain Sequences for d2yiid_:

Sequence, based on SEQRES records:

>d2yiid_ a.127.1.0 (D:) automated matches {Taxus wallichiana [TaxId: 29808]}
shvkdilglinafnevkkitvdgttpitvahvaalarrhdvkvaleaeqcrarvetcssw
vqrkaedgadiygvttgfgacssrrtnrlselqeslircllagvftkgcapsvdelpata
trsamllrlnsftygcsgirwevmealekllnsnvspkvplrgsvsasgdliplayiagl
ligkpsviarigddvevpapealsrvglrpfklqakeglalvngtsfatavastvmydan
vllllvetlcgmfcevifgreefahplihkvkphpgqiesaellewllrsspfqelsrey
ysidklkkpkqdryalrsspqwlaplvqtirdatttvetevnsandnpiidhandralhg
anfqgsavgfymdyvriavaglgkllfaqftelmieyysnglpgnlslgpdlsvdyglkg
ldiamaaysselqylanpvtthvhsaeqhnqdinslalisarkteealdilklmiashlt
amcqavdlrqleealvkvvenvvstladecglpndtkarllyvakavpvytylespcdpt
lplllglkqscfdtilalhkkdgietdtlvdrlaefekrlsdrlenemtavrvlyekkgh
ktadnndalvriqgskflpfyrfvreeldtgvmsarreqtpqedvqkvfdaiadgritvp
llhclqgfl

Sequence, based on observed residues (ATOM records):

>d2yiid_ a.127.1.0 (D:) automated matches {Taxus wallichiana [TaxId: 29808]}
shvkdilglinafnevkkitvdgttpitvahvaalarrhdvkvaleaeqcrarvetcssw
vqrkaedgadiygvttgfgacssrrtnrlselqeslircllagvftkvdelpatatrsam
llrlnsftygcsgirwevmealekllnsnvspkvplrgsvsasgdliplayiaglligkp
sviarigddvevpapealsrvglrpfklqakeglalvngtsfatavastvmydanvllll
vetlcgmfcevifgreefahplihkvkphpgqiesaellewllrsspfqelsreyysidk
lkkpkqdryalrsspqwlaplvqtirdatttvetevnsandnpiidhandralhganfqg
savgfymdyvriavaglgkllfaqftelmieyysnglpgnlslgpdlsvdyglkgldiam
aaysselqylanpvtthvhsaeqhnqdinslalisarkteealdilklmiashltamcqa
vdlrqleealvkvvenvvstladecglpndtkarllyvakavpvytylespcdptlplll
glkqscfdtilalhetdtlvdrlaefekrlsdrlenemtavrvlyekvriqgskflpfyr
fvreeldtgvmsarreqtpqedvqkvfdaiadgritvpllhclqgfl

Timeline for d2yiid_:

• d2yiid_ first appeared in SCOPe 2.01
  
• d2yiid_ appears in SCOPe 2.02
  
• d2yiid_ appears in SCOPe 2.04
  
• d2yiid_ appears in the current release, SCOPe 2.08