SCOPe 2.08: Domain d2yggb1: 2ygg B:5-149

Lineage for d2yggb1 (2ygg B:5-149)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.39: EF Hand-like [47472] (4 superfamilies)
   core: 4 helices; array of 2 hairpins, opened

4. Superfamily a.39.1: EF-hand [47473] (12 families)
   Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop

5. Family a.39.1.5: Calmodulin-like [47502] (24 proteins)
   Duplication: made with two pairs of EF-hands

6. Protein Calmodulin [47516] (13 species)

7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [158477] (19 PDB entries)

8. Domain d2yggb1: 2ygg B:5-149 [170785]
   Other proteins in same PDB: d2yggb2
   automated match to d1cfca_
   complexed with ca, mpd, mrd, tam

Details for d2yggb1

PDB Entry: 2ygg, 2.23 Å

PDB Description: Complex of CaMBR and CaM

PDB Compounds: (B:) calmodulin

SCOPe Domain Sequences for d2yggb1:

Sequence; same for both SEQRES and ATOM records:

>d2yggb1 a.39.1.5 (B:5-149) Calmodulin {Norway rat (Rattus norvegicus) [TaxId: 10116]}
lteeqiaefkeafslfdkdgdgtittkelgtvmrslgqnpteaelqdminevdadgngti
dfpefltmmarkmkdtdseeeireafrvfdkdgngyisaaelrhvmtnlgekltdeevde
mireadidgdgqvnyeefvqmmtak

Timeline for d2yggb1:

• d2yggb1 first appeared in SCOPe 2.01, called d2yggb_
  
• d2yggb1 appears in SCOPe 2.07