SCOPe 2.02: Domain d2y99a_: 2y99 A:

Lineage for d2y99a_ (2y99 A:)

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
   core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
   The nucleotide-binding modes of this and the next two folds/superfamilies are similar

4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families)

5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 proteins)
   also known as short-chain dehydrogenases and SDR family
   parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

6. Protein automated matches [190085] (34 species)
   not a true protein

7. Species Comamonas testosteroni [TaxId:285] [189779] (3 PDB entries)

8. Domain d2y99a_: 2y99 A: [170703]
   automated match to d1bdba_
   complexed with nad

Details for d2y99a_

PDB Entry: 2y99, 2.5 Å

PDB Description: crystal structure of cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (bphb)from pandoraea pnomenusa strain b-356 complex with co-enzyme nad

PDB Compounds: (A:) cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

SCOPe Domain Sequences for d2y99a_:

Sequence, based on SEQRES records:

>d2y99a_ c.2.1.2 (A:) automated matches {Comamonas testosteroni [TaxId: 285]}
mkltgevalitggasglgralvdrfvaegarvavldksaerlrelevahggnavgvvgdv
rslqdqkraaerclaafgkidtlipnagiwdystaladlpedkidaafddifhvnvkgyi
havkaclpalvssrgsvvftisnagfypngggplytatkhavvglvrqmafelaphvrvn
gvapggmntdlrgpsslglseqsissvpladmlksvlpigrmpaleeytgayvffatrgd
slpatgallnydggmgvrgfltaaggadlpeklni

Sequence, based on observed residues (ATOM records):

>d2y99a_ c.2.1.2 (A:) automated matches {Comamonas testosteroni [TaxId: 285]}
mkltgevalitggasglgralvdrfvaegarvavldksaerlrelevahggnavgvvgdv
rslqdqkraaerclaafgkidtlipnagiwdystaladlpedkidaafddifhvnvkgyi
havkaclpalvssrgsvvftisnagfypngggplytatkhavvglvrqmafelaphvrvn
gvapggmntdlrgpsslgvpladmlksvlpigrmpaleeytgayvffatrgdslpatgal
lnydggmgvrgfltaaggadlpeklni

Timeline for d2y99a_:

• d2y99a_ first appeared in SCOPe 2.01
  
• d2y99a_ appears in SCOPe 2.03
  
• d2y99a_ appears in the current release, SCOPe 2.08