Lineage for d2y93a_ (2y93 A:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2449371Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2449372Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2449736Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (71 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
  6. 2451247Protein automated matches [190085] (58 species)
    not a true protein
  7. 2451397Species Comamonas testosteroni [TaxId:285] [189779] (3 PDB entries)
  8. 2451400Domain d2y93a_: 2y93 A: [170701]
    automated match to d1bdba_

Details for d2y93a_

PDB Entry: 2y93 (more details), 2.22 Å

PDB Description: crystal structure of cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (bphb)from pandoraea pnomenusa strain b-356.
PDB Compounds: (A:) cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

SCOPe Domain Sequences for d2y93a_:

Sequence, based on SEQRES records: (download)

>d2y93a_ c.2.1.2 (A:) automated matches {Comamonas testosteroni [TaxId: 285]}
mkltgevalitggasglgralvdrfvaegarvavldksaerlrelevahggnavgvvgdv
rslqdqkraaerclaafgkidtlipnagiwdystaladlpedkidaafddifhvnvkgyi
havkaclpalvssrgsvvftisnagfypngggplytatkhavvglvrqmafelaphvrvn
gvapggmntdlrgpsslglseqsissvpladmlksvlpigrmpaleeytgayvffatrgd
slpatgallnydggmgvrgfltaaggadlpeklnin

Sequence, based on observed residues (ATOM records): (download)

>d2y93a_ c.2.1.2 (A:) automated matches {Comamonas testosteroni [TaxId: 285]}
mkltgevalitggasglgralvdrfvaegarvavldksaerlrelevahggnavgvvgdv
rslqdqkraaerclaafgkidtlipnagiwdystaladlpedkidaafddifhvnvkgyi
havkaclpalvssrgsvvftisnagfypngggplytatkhavvglvrqmafelaphvrvn
gvapggmntdlrgpsslgsvpladmlksvlpigrmpaleeytgayvffatrgdslpatga
llnydggmgvrgfltaaggadlpeklnin

SCOPe Domain Coordinates for d2y93a_:

Click to download the PDB-style file with coordinates for d2y93a_.
(The format of our PDB-style files is described here.)

Timeline for d2y93a_:

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Domains from other chains:
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d2y93b_