SCOPe 2.07: Domain d2y8eb_: 2y8e B:

Lineage for d2y8eb_ (2y8e B:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.8: G proteins [52592] (80 proteins)
   core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest

6. Protein automated matches [190047] (34 species)
   not a true protein

7. Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [189700] (1 PDB entry)

8. Domain d2y8eb_: 2y8e B: [170690]
   automated match to d1yzqa1
   complexed with gnp, mg, so4

Details for d2y8eb_

PDB Entry: 2y8e, 1.39 Å

PDB Description: crystal structure of d. melanogaster rab6 gtpase bound to gmppnp

PDB Compounds: (B:) rab-protein 6

SCOPe Domain Sequences for d2y8eb_:

Sequence; same for both SEQRES and ATOM records:

>d2y8eb_ c.37.1.8 (B:) automated matches {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
gnplrkfklvflgeqsvgktslitrfmydsfdntyqatigidflsktmyledrtvrlqlw
dtagqerfrslipsyirdstvavvvyditntnsfhqtskwiddvrtergsdviimlvgnk
tdlsdkrqvsteegerkakelnvmfietsakagynvkqlfrrvaaal

Timeline for d2y8eb_:

• d2y8eb_ first appeared in SCOPe 2.01
  
• d2y8eb_ appears in SCOPe 2.06
  
• d2y8eb_ appears in the current release, SCOPe 2.08