SCOPe 2.08: Domain d2y5sa1: 2y5s A:4-292

Lineage for d2y5sa1 (2y5s A:4-292)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.21: Dihydropteroate synthetase-like [51717] (3 families)

5. Family c.1.21.0: automated matches [191656] (1 protein)
   not a true family

6. Protein automated matches [191224] (11 species)
   not a true protein

7. Species Burkholderia cenocepacia [TaxId:95486] [189624] (2 PDB entries)

8. Domain d2y5sa1: 2y5s A:4-292 [170631]
   Other proteins in same PDB: d2y5sa2
   automated match to d1aj0a_
   complexed with 78h, cl, edo

Details for d2y5sa1

PDB Entry: 2y5s, 1.95 Å

PDB Description: Crystal structure of Burkholderia cenocepacia dihydropteroate synthase complexed with 7,8-dihydropteroate.

PDB Compounds: (A:) dihydropteroate synthase

SCOPe Domain Sequences for d2y5sa1:

Sequence, based on SEQRES records:

>d2y5sa1 c.1.21.0 (A:4-292) automated matches {Burkholderia cenocepacia [TaxId: 95486]}
flpaplqcgrfeltferplvmgilnatpdsfsdggrflarddalrraermiaegadlldi
ggestrpgappvpldeelarviplvealrplnvplsidtykpavmraalaagadlindiw
gfrqpgaidavrdgnsglcamhmlgepqtmqvgepdygdvvtdvrdflaaraqalrdagv
aaericvdpgfgfgkavvddnyallaalpdtaparpdgraypilagmsrksmlgaviggk
pplervaasvaaalcavergaaivrvhdvaatvdalsvwnavraaarqr

Sequence, based on observed residues (ATOM records):

>d2y5sa1 c.1.21.0 (A:4-292) automated matches {Burkholderia cenocepacia [TaxId: 95486]}
flpaplqcgrfeltferplvmgilnatparddalrraermiaegadlldiggestrpgap
pvpldeelarviplvealrplnvplsidtykpavmraalaagadlindiwgfrqpgaida
vrdgnsglcamhmlgepqtmqvgepdygdvvtdvrdflaaraqalrdagvaaericvdpg
fgfgkavvddnyallaalpdtaparpdgraypilagmsrksmlgaviggkpplervaasv
aaalcavergaaivrvhdvaatvdalsvwnavraaarqr

Timeline for d2y5sa1:

• d2y5sa1 first appeared in SCOPe 2.01, called d2y5sa_
  
• d2y5sa1 appears in SCOPe 2.07