SCOPe 2.05: Domain d2y5ja_: 2y5j A:

Lineage for d2y5ja_ (2y5j A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.21: Dihydropteroate synthetase-like [51717] (3 families)

5. Family c.1.21.0: automated matches [191656] (1 protein)
   not a true family

6. Protein automated matches [191224] (3 species)
   not a true protein

7. Species Burkholderia cenocepacia [TaxId:95486] [189624] (2 PDB entries)

8. Domain d2y5ja_: 2y5j A: [170618]
   automated match to d1aj0a_
   complexed with edo

Details for d2y5ja_

PDB Entry: 2y5j, 2.33 Å

PDB Description: Crystal structure of Burkholderia cenocepacia dihydropteroate synthase.

PDB Compounds: (A:) dihydropteroate synthase

SCOPe Domain Sequences for d2y5ja_:

Sequence, based on SEQRES records:

>d2y5ja_ c.1.21.0 (A:) automated matches {Burkholderia cenocepacia [TaxId: 95486]}
tflpaplqcgrfeltferplvmgilnatpdsfsdggrflarddalrraermiaegadlld
iggestrpgappvpldeelarviplvealrplnvplsidtykpavmraalaagadlindi
wgfrqpgaidavrdgnsglcamhmlgepqtmqvgepdygdvvtdvrdflaaraqalrdag
vaaericvdpgfgfgkavvddnyallaalpdtaparpdgraypilagmsrksmlgavigg
kpplervaasvaaalcavergaaivrvhdvaatvdalsvwnavraaarqr

Sequence, based on observed residues (ATOM records):

>d2y5ja_ c.1.21.0 (A:) automated matches {Burkholderia cenocepacia [TaxId: 95486]}
tflpaplqcgrfeltferplvmgilnarddalrraermiaegadlldigppvpldeelar
viplvealrplnvplsidtykpavmraalaagadlindiwgfrqpgaidavrdgnsglca
mhmlgepqtmqvgepdygdvvtdvrdflaaraqalrdagvaaericvdpgfgfgkavvdd
nyallaalpdtaparpdgraypilagmsrksmlgaviggkpplervaasvaaalcaverg
aaivrvhdvaatvdalsvwnavraaarqr

Timeline for d2y5ja_:

• d2y5ja_ first appeared in SCOPe 2.01
  
• d2y5ja_ appears in SCOPe 2.04
  
• d2y5ja_ is called d2y5ja1 in SCOPe 2.06
  
• d2y5ja_ appears in the current release, SCOPe 2.08, called d2y5ja1