Lineage for d2y28b_ (2y28 B:)

  1. Root: SCOPe 2.08
  2. 2923792Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
  3. 2972806Fold d.118: N-acetylmuramoyl-L-alanine amidase-like [55845] (1 superfamily)
    contains mixed beta-sheet
  4. 2972807Superfamily d.118.1: N-acetylmuramoyl-L-alanine amidase-like [55846] (2 families) (S)
  5. 2972808Family d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like [55847] (11 proteins)
    Family 2 zinc amidase;
  6. 2972809Protein AmpD protein [82775] (1 species)
  7. 2972810Species Citrobacter freundii [TaxId:546] [82776] (8 PDB entries)
  8. 2972812Domain d2y28b_: 2y28 B: [170536]
    automated match to d1j3ga_
    complexed with zn

Details for d2y28b_

PDB Entry: 2y28 (more details), 1.8 Å

PDB Description: crystal structure of Se-Met AmpD derivative
PDB Compounds: (B:) 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd

SCOPe Domain Sequences for d2y28b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d2y28b_ d.118.1.1 (B:) AmpD protein {Citrobacter freundii [TaxId: 546]}
mlldegwlaearrvpsphydcrpddenpsllvvhnislppgefggpwidalftgtidpna
hpyfagiahlrvsahclirrdgeivqyvpfdkrawhagvssyqgrercndfsigielegt
dtlaytdaqyqqlaavtnalitrypaiannmtghcniaperktdpgpsfdwarfralv

SCOPe Domain Coordinates for d2y28b_:

Click to download the PDB-style file with coordinates for d2y28b_.
(The format of our PDB-style files is described here.)

Timeline for d2y28b_: